RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 CST5P28325 142 aaPredicted RBP16.68■□□□□ 0.26
IRF3-224ENST00000599680 C1orf53Q5VUE5 145 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 STOX1Q6ZVD7 989 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 CATIPQ7Z7H3 387 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 TLK2Q86UE8 772 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 SKAP1Q86WV1 359 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 STAG2Q8N3U4 1231 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 DNERQ8NFT8 737 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 LSG1Q9H089 658 aaKnown RBP16.68■□□□□ 0.26
IRF3-224ENST00000599680 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 MRPL11Q9Y3B7 192 aaKnown RBP16.68■□□□□ 0.26
IRF3-224ENST00000599680 TAF6LQ9Y6J9 622 aa16.68■□□□□ 0.26
IRF3-224ENST00000599680 DCDC2CA8MYV0 355 aa16.67■□□□□ 0.26
IRF3-224ENST00000599680 PQBP1O60828 265 aaKnown RBP16.67■□□□□ 0.26
IRF3-224ENST00000599680 TLE2Q04725 743 aa16.67■□□□□ 0.26
IRF3-224ENST00000599680 TDHQ8IZJ6 230 aa16.67■□□□□ 0.26
IRF3-224ENST00000599680 RGS22Q8NE09 1264 aa16.67■□□□□ 0.26
IRF3-224ENST00000599680 MORC4Q8TE76 937 aa16.67■□□□□ 0.26
IRF3-224ENST00000599680 AMNQ9BXJ7 453 aa16.67■□□□□ 0.26
IRF3-224ENST00000599680 MAF1Q9H063 256 aa16.67■□□□□ 0.26
IRF3-224ENST00000599680 PDGFCQ9NRA1 345 aa16.67■□□□□ 0.26
IRF3-224ENST00000599680 SLC27A2O14975 620 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
IRF3-224ENST00000599680 ZEB2O60315 1214 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 SMPD1P17405 629 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 MCM5P33992 734 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 BEX3Q00994 111 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 TRAF1Q13077 416 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 GRM4Q14833 912 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 RNF20Q5VTR2 975 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 TAPT1Q6NXT6 567 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 MB21D2Q8IYB1 491 aaPredicted RBP16.66■□□□□ 0.26
IRF3-224ENST00000599680 PDLIM7Q9NR12 457 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 PCDH10Q9P2E7 1040 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 ELP1O95163 1332 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 MROH7Q68CQ1 1323 aa16.66■□□□□ 0.26
IRF3-224ENST00000599680 RANBP2P49792 3224 aaKnown RBP16.66■□□□□ 0.26
IRF3-224ENST00000599680 A0A0U1RQG5 324 aaPredicted RBP16.65■□□□□ 0.26
IRF3-224ENST00000599680 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
IRF3-224ENST00000599680 ZBTB5O15062 677 aa16.65■□□□□ 0.26
IRF3-224ENST00000599680 PRC1O43663 620 aa16.65■□□□□ 0.26
IRF3-224ENST00000599680 CDC45O75419 566 aa16.65■□□□□ 0.26
IRF3-224ENST00000599680 CLTBP09497 229 aa16.65■□□□□ 0.26
IRF3-224ENST00000599680 ANTXR2P58335 489 aa16.65■□□□□ 0.26
IRF3-224ENST00000599680 IRX5P78411 483 aaPredicted RBP16.65■□□□□ 0.26
IRF3-224ENST00000599680 FSCN1Q16658 493 aaKnown RBP16.65■□□□□ 0.26
IRF3-224ENST00000599680 CREB3L3Q68CJ9 461 aa16.65■□□□□ 0.26
IRF3-224ENST00000599680 CCSAPQ6IQ19 270 aaPredicted RBP16.65■□□□□ 0.26
IRF3-224ENST00000599680 WDR11Q9BZH6 1224 aa16.65■□□□□ 0.26
IRF3-224ENST00000599680 CCDC69A6NI79 296 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 CFBP00751 764 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 DUSP28Q4G0W2 176 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
IRF3-224ENST00000599680 IGDCC4Q8TDY8 1250 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 MTA3Q9BTC8 594 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 TMEM39AQ9NV64 488 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
IRF3-224ENST00000599680 Q9Y3F1 56 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 PCDHA1Q9Y5I3 950 aa16.64■□□□□ 0.25
IRF3-224ENST00000599680 TLR3O15455 904 aaKnown RBP16.63■□□□□ 0.25
IRF3-224ENST00000599680 CABYRO75952 493 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 RAG1P15918 1043 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 KIF5BP33176 963 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 PPP2R5BQ15173 497 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 BRDTQ58F21 947 aaPredicted RBP16.63■□□□□ 0.25
IRF3-224ENST00000599680 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 SH3RF1Q7Z6J0 888 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 ZNF654Q8IZM8 581 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 TMTC2Q8N394 836 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 NSUN6Q8TEA1 469 aaKnown RBP16.63■□□□□ 0.25
IRF3-224ENST00000599680 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 BADQ92934 168 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 TOX2Q96NM4 488 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 PIGSQ96S52 555 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 RMDN3Q96TC7 470 aa16.63■□□□□ 0.25
IRF3-224ENST00000599680 NKRFO15226 690 aaKnown RBP eCLIP16.62■□□□□ 0.25
IRF3-224ENST00000599680 CTAGE5O15320 804 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 DDAH1O94760 285 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 EDNRBP24530 442 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 CPT1AP50416 773 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 NKX3-2P78367 333 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 TROAPQ12815 778 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 NECTIN1Q15223 517 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 CXCL17Q6UXB2 119 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 ANKRD33Q7Z3H0 272 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 OR6J1Q8NGC5 347 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 SYTL5Q8TDW5 730 aaPredicted RBP16.62■□□□□ 0.25
IRF3-224ENST00000599680 TBC1D5Q92609 795 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 MTMR8Q96EF0 704 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 TAAR1Q96RJ0 339 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 LY9Q9HBG7 655 aa16.62■□□□□ 0.25
IRF3-224ENST00000599680 PNMA6FA0A0J9YX94 578 aa16.61■□□□□ 0.25
IRF3-224ENST00000599680 RBM47A0AV96 593 aaKnown RBP16.61■□□□□ 0.25
IRF3-224ENST00000599680 TRIM43BA6NCK2 446 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 325.3 ms