RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 PQBP1O60828 265 aaKnown RBP17.01■□□□□ 0.31
XRCC1-208ENST00000598422 C1orf53Q5VUE5 145 aa17.01■□□□□ 0.31
XRCC1-208ENST00000598422 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
XRCC1-208ENST00000598422 IQSEC1Q6DN90 963 aa17.01■□□□□ 0.31
XRCC1-208ENST00000598422 HOMER1Q86YM7 354 aa17.01■□□□□ 0.31
XRCC1-208ENST00000598422 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
XRCC1-208ENST00000598422 MORC4Q8TE76 937 aa17.01■□□□□ 0.31
XRCC1-208ENST00000598422 AMNQ9BXJ7 453 aa17.01■□□□□ 0.31
XRCC1-208ENST00000598422 MAD2L2Q9UI95 211 aa17.01■□□□□ 0.31
XRCC1-208ENST00000598422 PALM3A6NDB9 673 aaPredicted RBP17■□□□□ 0.31
XRCC1-208ENST00000598422 ZBTB5O15062 677 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 PRC1O43663 620 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 ZEB2O60315 1214 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 ASGR1P07306 291 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 SMPD1P17405 629 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 MCM5P33992 734 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 ANTXR2P58335 489 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 TLE2Q04725 743 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 TRAF1Q13077 416 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 NFXL1Q6ZNB6 911 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 MAF1Q9H063 256 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 SENP2Q9HC62 589 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 PDGFCQ9NRA1 345 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 PLXNA1Q9UIW2 1896 aa17■□□□□ 0.31
XRCC1-208ENST00000598422 ELP1O95163 1332 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 DYNC1LI2O43237 492 aaPredicted RBP16.99■□□□□ 0.31
XRCC1-208ENST00000598422 DDAH1O94760 285 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 KIF5BP33176 963 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 TROAPQ12815 778 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 FSCN1Q16658 493 aaKnown RBP16.99■□□□□ 0.31
XRCC1-208ENST00000598422 CCSAPQ6IQ19 270 aaPredicted RBP16.99■□□□□ 0.31
XRCC1-208ENST00000598422 TAPT1Q6NXT6 567 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 TDHQ8IZJ6 230 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 CTCFLQ8NI51 663 aaPredicted RBP16.99■□□□□ 0.31
XRCC1-208ENST00000598422 SYTL5Q8TDW5 730 aaPredicted RBP16.99■□□□□ 0.31
XRCC1-208ENST00000598422 MTA3Q9BTC8 594 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 PDLIM7Q9NR12 457 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 PCDH10Q9P2E7 1040 aa16.99■□□□□ 0.31
XRCC1-208ENST00000598422 GNEQ9Y223 722 aaKnown RBP16.99■□□□□ 0.31
XRCC1-208ENST00000598422 MROH7Q68CQ1 1323 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 CCDC69A6NI79 296 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 DCDC2CA8MYV0 355 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 CLTBP09497 229 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 IRX5P78411 483 aaPredicted RBP16.98■□□□□ 0.31
XRCC1-208ENST00000598422 BEX3Q00994 111 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 PPP2R5BQ15173 497 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 NECTIN1Q15223 517 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 ZNF654Q8IZM8 581 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 IGDCC4Q8TDY8 1250 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 NSUN6Q8TEA1 469 aaKnown RBP16.98■□□□□ 0.31
XRCC1-208ENST00000598422 TMEM87BQ96K49 555 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 WDR11Q9BZH6 1224 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 LY9Q9HBG7 655 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 Q9Y3F1 56 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 PCDHA1Q9Y5I3 950 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 ALPK3Q96L96 1907 aa16.98■□□□□ 0.31
XRCC1-208ENST00000598422 TRIOBPQ9H2D6 2365 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 A0A0U1RQG5 324 aaPredicted RBP16.97■□□□□ 0.31
XRCC1-208ENST00000598422 SH2B2O14492 632 aaPredicted RBP16.97■□□□□ 0.31
XRCC1-208ENST00000598422 CFBP00751 764 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 EDNRBP24530 442 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 DUSP28Q4G0W2 176 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 SCFD2Q8WU76 684 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 MTMR8Q96EF0 704 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 PIGSQ96S52 555 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 RMDN3Q96TC7 470 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 MYL10Q9BUA6 226 aa16.97■□□□□ 0.31
XRCC1-208ENST00000598422 ZNFX1Q9P2E3 1918 aaKnown RBP16.97■□□□□ 0.31
XRCC1-208ENST00000598422 CABYRO75952 493 aa16.96■□□□□ 0.31
XRCC1-208ENST00000598422 NKX3-2P78367 333 aa16.96■□□□□ 0.31
XRCC1-208ENST00000598422 BRDTQ58F21 947 aaPredicted RBP16.96■□□□□ 0.31
XRCC1-208ENST00000598422 ARHGEF16Q5VV41 709 aa16.96■□□□□ 0.31
XRCC1-208ENST00000598422 CXCL17Q6UXB2 119 aa16.96■□□□□ 0.31
XRCC1-208ENST00000598422 ANKRD33Q7Z3H0 272 aa16.96■□□□□ 0.31
XRCC1-208ENST00000598422 OR6J1Q8NGC5 347 aa16.96■□□□□ 0.31
XRCC1-208ENST00000598422 RIOX1Q9H6W3 641 aa16.96■□□□□ 0.31
XRCC1-208ENST00000598422 GPHNQ9NQX3 736 aaPredicted RBP16.96■□□□□ 0.31
XRCC1-208ENST00000598422 TMEM39AQ9NV64 488 aa16.96■□□□□ 0.31
XRCC1-208ENST00000598422 NKRFO15226 690 aaKnown RBP eCLIP16.95■□□□□ 0.3
XRCC1-208ENST00000598422 CTAGE5O15320 804 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
XRCC1-208ENST00000598422 RAG1P15918 1043 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 PTGS1P23219 599 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 GNAQP50148 359 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 CPT1AP50416 773 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 TTLL4Q14679 1199 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 SH3RF1Q7Z6J0 888 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 PIBF1Q8WXW3 757 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 TBC1D5Q92609 795 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 TOX2Q96NM4 488 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 TAAR1Q96RJ0 339 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 IWS1Q96ST2 819 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 MAP3K14Q99558 947 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 LZTS2Q9BRK4 669 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 COL20A1Q9P218 1284 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 SEC63Q9UGP8 760 aaKnown RBP16.95■□□□□ 0.3
XRCC1-208ENST00000598422 SLC12A7Q9Y666 1083 aa16.95■□□□□ 0.3
XRCC1-208ENST00000598422 PNMA6FA0A0J9YX94 578 aa16.94■□□□□ 0.3
XRCC1-208ENST00000598422 RBM47A0AV96 593 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms