RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 DNERQ8NFT8 737 aa24.48■■□□□ 1.51
PNKP-209ENST00000596726 LENG1Q96BZ8 264 aaPredicted RBP24.48■■□□□ 1.51
PNKP-209ENST00000596726 LZTS2Q9BRK4 669 aa24.48■■□□□ 1.51
PNKP-209ENST00000596726 USP26Q9BXU7 913 aa24.48■■□□□ 1.51
PNKP-209ENST00000596726 XPNPEP3Q9NQH7 507 aa24.48■■□□□ 1.51
PNKP-209ENST00000596726 PNMA6FA0A0J9YX94 578 aa24.47■■□□□ 1.51
PNKP-209ENST00000596726 ADCY6O43306 1168 aa24.47■■□□□ 1.51
PNKP-209ENST00000596726 DUSP11O75319 330 aaKnown RBP24.47■■□□□ 1.51
PNKP-209ENST00000596726 GHRHRQ02643 423 aa24.47■■□□□ 1.51
PNKP-209ENST00000596726 HOMER1Q86YM7 354 aa24.47■■□□□ 1.51
PNKP-209ENST00000596726 PCDHA1Q9Y5I3 950 aa24.47■■□□□ 1.51
PNKP-209ENST00000596726 ADAMTS4O75173 837 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 PGK1P00558 417 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 RXRAP19793 462 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 EDNRBP24530 442 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 TRAF1Q13077 416 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 TAPT1Q6NXT6 567 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 APOA5Q6Q788 366 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 SRBD1Q8N5C6 995 aaKnown RBP24.46■■□□□ 1.51
PNKP-209ENST00000596726 FANCBQ8NB91 859 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 SYTL5Q8TDW5 730 aaPredicted RBP24.46■■□□□ 1.51
PNKP-209ENST00000596726 JAKMIP1Q96N16 626 aaKnown RBP24.46■■□□□ 1.51
PNKP-209ENST00000596726 CEP290O15078 2479 aa24.46■■□□□ 1.51
PNKP-209ENST00000596726 KBTBD13C9JR72 458 aa24.45■■□□□ 1.5
PNKP-209ENST00000596726 PLEKHA8P1O95397 391 aa24.45■■□□□ 1.5
PNKP-209ENST00000596726 CPA1P15085 419 aa24.45■■□□□ 1.5
PNKP-209ENST00000596726 SENP6Q9GZR1 1112 aaPredicted RBP24.45■■□□□ 1.5
PNKP-209ENST00000596726 VTA1Q9NP79 307 aa24.45■■□□□ 1.5
PNKP-209ENST00000596726 COL20A1Q9P218 1284 aa24.45■■□□□ 1.5
PNKP-209ENST00000596726 BRPF3Q9ULD4 1205 aa24.45■■□□□ 1.5
PNKP-209ENST00000596726 SYNRGQ9UMZ2 1314 aa24.44■■□□□ 1.5
PNKP-209ENST00000596726 EVI5O60447 810 aa24.44■■□□□ 1.5
PNKP-209ENST00000596726 HSD17B4P51659 736 aa24.44■■□□□ 1.5
PNKP-209ENST00000596726 RNF180Q86T96 592 aa24.44■■□□□ 1.5
PNKP-209ENST00000596726 RAB11FIP4Q86YS3 637 aa24.44■■□□□ 1.5
PNKP-209ENST00000596726 SAMD3Q8N6K7 520 aa24.44■■□□□ 1.5
PNKP-209ENST00000596726 KLHDC9Q8NEP7 349 aa24.44■■□□□ 1.5
PNKP-209ENST00000596726 TAAR1Q96RJ0 339 aa24.44■■□□□ 1.5
PNKP-209ENST00000596726 UPF3AQ9H1J1 476 aaKnown RBP24.44■■□□□ 1.5
PNKP-209ENST00000596726 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.43■■□□□ 1.5
PNKP-209ENST00000596726 H0YGN5 161 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 ADCYAP1R1P41586 468 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 IQSEC1Q6DN90 963 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 BLOC1S2Q6QNY1 142 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 SYNE3Q6ZMZ3 975 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 TMTC3Q6ZXV5 915 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 EEPD1Q7L9B9 569 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 MICU3Q86XE3 530 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 FBXO16Q8IX29 292 aaPredicted RBP24.43■■□□□ 1.5
PNKP-209ENST00000596726 FBXL16Q8N461 479 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 PDGFCQ9NRA1 345 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 MAP3K20Q9NYL2 800 aaKnown RBP24.43■■□□□ 1.5
PNKP-209ENST00000596726 PHF24Q9UPV7 400 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 GNEQ9Y223 722 aaKnown RBP24.43■■□□□ 1.5
PNKP-209ENST00000596726 NR2E3Q9Y5X4 410 aa24.43■■□□□ 1.5
PNKP-209ENST00000596726 RBM47A0AV96 593 aaKnown RBP24.42■■□□□ 1.5
PNKP-209ENST00000596726 CFBP00751 764 aa24.42■■□□□ 1.5
PNKP-209ENST00000596726 RPS6KB1P23443 525 aa24.42■■□□□ 1.5
PNKP-209ENST00000596726 GJA9P57773 515 aa24.42■■□□□ 1.5
PNKP-209ENST00000596726 NKX3-2P78367 333 aa24.42■■□□□ 1.5
PNKP-209ENST00000596726 TNFAIP2Q03169 654 aa24.42■■□□□ 1.5
PNKP-209ENST00000596726 LRRC26Q2I0M4 334 aa24.42■■□□□ 1.5
PNKP-209ENST00000596726 CCSAPQ6IQ19 270 aaPredicted RBP24.42■■□□□ 1.5
PNKP-209ENST00000596726 CMTR1Q8N1G2 835 aaKnown RBP24.42■■□□□ 1.5
PNKP-209ENST00000596726 RRP36Q96EU6 259 aaKnown RBP24.42■■□□□ 1.5
PNKP-209ENST00000596726 MPHOSPH6Q99547 160 aaKnown RBP24.42■■□□□ 1.5
PNKP-209ENST00000596726 TSEN34Q9BSV6 310 aaKnown RBP24.42■■□□□ 1.5
PNKP-209ENST00000596726 AGXT2Q9BYV1 514 aa24.42■■□□□ 1.5
PNKP-209ENST00000596726 B4DLN1 442 aa24.41■■□□□ 1.5
PNKP-209ENST00000596726 ZBTB43O43298 467 aa24.41■■□□□ 1.5
PNKP-209ENST00000596726 MYCNP04198 464 aaPredicted RBP24.41■■□□□ 1.5
PNKP-209ENST00000596726 PSMA5P28066 241 aa24.41■■□□□ 1.5
PNKP-209ENST00000596726 CST5P28325 142 aaPredicted RBP24.41■■□□□ 1.5
PNKP-209ENST00000596726 MRPL12P52815 198 aaKnown RBP24.41■■□□□ 1.5
PNKP-209ENST00000596726 Q6ZUG5 572 aa24.41■■□□□ 1.5
PNKP-209ENST00000596726 PIBF1Q8WXW3 757 aa24.41■■□□□ 1.5
PNKP-209ENST00000596726 KIAA1217Q5T5P2 1943 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 KLF18A0A0U1RQI7 1052 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 MYADML2A6NDP7 307 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 CTAGE5O15320 804 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 SMPD1P17405 629 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 RCAN1P53805 252 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 PDE4DQ08499 809 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 NSUN6Q8TEA1 469 aaKnown RBP24.4■■□□□ 1.5
PNKP-209ENST00000596726 IWS1Q96ST2 819 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 RMDN3Q96TC7 470 aa24.4■■□□□ 1.5
PNKP-209ENST00000596726 RBM28Q9NW13 759 aaKnown RBP24.4■■□□□ 1.5
PNKP-209ENST00000596726 CASTP20810 708 aaKnown RBP24.39■■□□□ 1.49
PNKP-209ENST00000596726 IRX5P78411 483 aaPredicted RBP24.39■■□□□ 1.49
PNKP-209ENST00000596726 SNX17Q15036 470 aa24.39■■□□□ 1.49
PNKP-209ENST00000596726 TMEM63BQ5T3F8 832 aa24.39■■□□□ 1.49
PNKP-209ENST00000596726 SLC39A5Q6ZMH5 540 aa24.39■■□□□ 1.49
PNKP-209ENST00000596726 C7orf61Q8IZ16 206 aa24.39■■□□□ 1.49
PNKP-209ENST00000596726 ZSWIM6Q9HCJ5 1215 aa24.39■■□□□ 1.49
PNKP-209ENST00000596726 FAM217BQ9NTX9 383 aaPredicted RBP24.39■■□□□ 1.49
PNKP-209ENST00000596726 Q9Y3F1 56 aa24.39■■□□□ 1.49
PNKP-209ENST00000596726 ATN1P54259 1190 aaPredicted RBP24.38■■□□□ 1.49
PNKP-209ENST00000596726 FUT2Q10981 343 aa24.38■■□□□ 1.49
PNKP-209ENST00000596726 KCNA10Q16322 511 aa24.38■■□□□ 1.49
PNKP-209ENST00000596726 RTN1Q16799 776 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms