RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 PTCH2Q9Y6C5 1203 aa9.64□□□□□ -0.87
VRK3-211ENST00000596445 STK36Q9NRP7 1315 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 MCM3APO60318 1980 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 STXBP3O00186 592 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 PPFIA3O75145 1194 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 HSD17B4P51659 736 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 NAPAP54920 295 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 CNTN2Q02246 1040 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 ST3GAL1Q11201 340 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 OLFML2BQ68BL8 750 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 SLC30A10Q6XR72 485 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 TEX2Q8IWB9 1127 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 CCDC83Q8IWF9 413 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 FAM133AQ8N9E0 248 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 NSUN7Q8NE18 718 aaKnown RBP9.63□□□□□ -0.87
VRK3-211ENST00000596445 NPLOC4Q8TAT6 608 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 CCDC12Q8WUD4 166 aaPredicted RBP9.63□□□□□ -0.87
VRK3-211ENST00000596445 TBC1D5Q92609 795 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 LLPHQ9BRT6 129 aaKnown RBP9.63□□□□□ -0.87
VRK3-211ENST00000596445 PSTPIP2Q9H939 334 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 SH3GLB2Q9NR46 395 aa9.63□□□□□ -0.87
VRK3-211ENST00000596445 GCOM1H8Y6P7 765 aaPredicted RBP9.62□□□□□ -0.87
VRK3-211ENST00000596445 PIK3CDO00329 1044 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 CFBP00751 764 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 POLR2MP0CAP2 368 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 ELNP15502 786 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 CALML3P27482 149 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 GRK4P32298 578 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 CCL14Q16627 93 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 SLC9C1Q4G0N8 1177 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 COL13A1Q5TAT6 717 aaPredicted RBP9.62□□□□□ -0.87
VRK3-211ENST00000596445 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 ZNF467Q7Z7K2 595 aaPredicted RBP9.62□□□□□ -0.87
VRK3-211ENST00000596445 FAM177A1Q8N128 213 aaPredicted RBP9.62□□□□□ -0.87
VRK3-211ENST00000596445 MSL3Q8N5Y2 521 aaKnown RBP9.62□□□□□ -0.87
VRK3-211ENST00000596445 DNERQ8NFT8 737 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 SYTL5Q8TDW5 730 aaPredicted RBP9.62□□□□□ -0.87
VRK3-211ENST00000596445 WASF1Q92558 559 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 CUL5Q93034 780 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 SNX21Q969T3 373 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 MAML3Q96JK9 1138 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 MCOLN1Q9GZU1 580 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 GLT8D2Q9H1C3 349 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 RIC8AQ9NPQ8 531 aa9.62□□□□□ -0.87
VRK3-211ENST00000596445 ORC3Q9UBD5 711 aaPredicted RBP9.62□□□□□ -0.87
VRK3-211ENST00000596445 ADD3Q9UEY8 706 aaKnown RBP9.62□□□□□ -0.87
VRK3-211ENST00000596445 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 ESYT2A0FGR8 921 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 SOWAHBA6NEL2 793 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 SMCO2A6NFE2 343 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 IGHA2P01877 340 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 HMGCRP04035 888 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 FDPSP14324 419 aaKnown RBP9.61□□□□□ -0.87
VRK3-211ENST00000596445 HOXA13P31271 388 aaPredicted RBP9.61□□□□□ -0.87
VRK3-211ENST00000596445 MRPL12P52815 198 aaKnown RBP9.61□□□□□ -0.87
VRK3-211ENST00000596445 HMGN5P82970 282 aaKnown RBP9.61□□□□□ -0.87
VRK3-211ENST00000596445 PWP2Q15269 919 aaKnown RBP9.61□□□□□ -0.87
VRK3-211ENST00000596445 MFSD14CQ5VZR4 134 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 USP17L6PQ6QN14 398 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 MAMDC4Q6UXC1 1216 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 CCDC148Q8NFR7 591 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 SMARCC2Q8TAQ2 1214 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 TRIB2Q92519 343 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 FGD4Q96M96 766 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 TINF2Q9BSI4 451 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 ZMYND12Q9H0C1 365 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 FLRT1Q9NZU1 646 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 VPS54Q9P1Q0 977 aa9.61□□□□□ -0.87
VRK3-211ENST00000596445 BIN2Q9UBW5 565 aaPredicted RBP9.61□□□□□ -0.87
VRK3-211ENST00000596445 ASTN1O14525 1302 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 SYNGAP1Q96PV0 1343 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 ASB14A6NK59 587 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 B4DLN1 442 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 MEIS2O14770 477 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 JAK2O60674 1132 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 DTNBO60941 627 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 XBP1P17861 261 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 GNA11P29992 359 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 ALDH5A1P51649 535 aaPredicted RBP9.6□□□□□ -0.87
VRK3-211ENST00000596445 ADCY7P51828 1080 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 CUL4AQ13619 759 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 BICD2Q8TD16 824 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 MORC4Q8TE76 937 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 NSUN6Q8TEA1 469 aaKnown RBP9.6□□□□□ -0.87
VRK3-211ENST00000596445 SH3TC2Q8TF17 1288 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 ARMC5Q96C12 935 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 AIFM3Q96NN9 605 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 PURBQ96QR8 312 aaKnown RBP9.6□□□□□ -0.87
VRK3-211ENST00000596445 TAAR1Q96RJ0 339 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 IWS1Q96ST2 819 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 RMDN3Q96TC7 470 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 MPHOSPH6Q99547 160 aaKnown RBP9.6□□□□□ -0.87
VRK3-211ENST00000596445 ALG1Q9BT22 464 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 C6orf50Q9HD87 102 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 COL20A1Q9P218 1284 aa9.6□□□□□ -0.87
VRK3-211ENST00000596445 KIAA1217Q5T5P2 1943 aa9.59□□□□□ -0.87
VRK3-211ENST00000596445 K7ELQ4 463 aaPredicted RBP9.59□□□□□ -0.87
VRK3-211ENST00000596445 INHAP05111 366 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms