RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 CYTH3O43739 400 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 PPP1R11O60927 126 aaPredicted RBP18.34■□□□□ 0.53
ZNF550-207ENST00000595560 EDNRBP24530 442 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 KIF5BP33176 963 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 GJA9P57773 515 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 NKX3-2P78367 333 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 TNFAIP2Q03169 654 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 KRT32Q14532 448 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 C1orf53Q5VUE5 145 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 CCSAPQ6IQ19 270 aaPredicted RBP18.34■□□□□ 0.53
ZNF550-207ENST00000595560 TAPT1Q6NXT6 567 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 CHRDL2Q6WN34 429 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 SLC39A5Q6ZMH5 540 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 RASEFQ8IZ41 740 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 CTCFLQ8NI51 663 aaPredicted RBP18.34■□□□□ 0.53
ZNF550-207ENST00000595560 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 NEK1Q96PY6 1258 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 PRO3102Q9H379 93 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 SPC25Q9HBM1 224 aa18.34■□□□□ 0.53
ZNF550-207ENST00000595560 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.33■□□□□ 0.52
ZNF550-207ENST00000595560 A0A1W2PQ45 241 aaPredicted RBP18.33■□□□□ 0.52
ZNF550-207ENST00000595560 A0A1W2PQY0 241 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 MOXD2PA6NHM9 499 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 C6orf222P0C671 652 aaPredicted RBP18.33■□□□□ 0.52
ZNF550-207ENST00000595560 GHRHRQ02643 423 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 TRAF1Q13077 416 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 HABP4Q5JVS0 413 aaKnown RBP18.33■□□□□ 0.52
ZNF550-207ENST00000595560 IQSEC1Q6DN90 963 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 EEPD1Q7L9B9 569 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 SGMS1Q86VZ5 419 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 FERMT2Q96AC1 680 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 PIGSQ96S52 555 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 MYL10Q9BUA6 226 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 SPZ1Q9BXG8 430 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 ZMYND8Q9ULU4 1186 aaPredicted RBP18.33■□□□□ 0.52
ZNF550-207ENST00000595560 GNEQ9Y223 722 aaKnown RBP18.33■□□□□ 0.52
ZNF550-207ENST00000595560 KIAA1217Q5T5P2 1943 aa18.33■□□□□ 0.52
ZNF550-207ENST00000595560 PNMA6FA0A0J9YX94 578 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 MYADML2A6NDP7 307 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 B4DLN1 442 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 OPLAHO14841 1288 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 REC8O95072 547 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 CALM1P0DP23 149 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 CALM2P0DP24 149 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 CALM3P0DP25 149 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 SMARCA1P28370 1054 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 MRPL12P52815 198 aaKnown RBP18.32■□□□□ 0.52
ZNF550-207ENST00000595560 ACLYP53396 1101 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 RTP1P59025 263 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 PDE4DQ08499 809 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 ADCK5Q3MIX3 580 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 HOMER1Q86YM7 354 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 PCSK9Q8NBP7 692 aaKnown RBP18.32■□□□□ 0.52
ZNF550-207ENST00000595560 SYTL5Q8TDW5 730 aaPredicted RBP18.32■□□□□ 0.52
ZNF550-207ENST00000595560 TBC1D5Q92609 795 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 KCNB2Q92953 911 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 LZTS2Q9BRK4 669 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 LRRC2Q9BYS8 371 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 PDGFCQ9NRA1 345 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 LTBP2Q14767 1821 aa18.32■□□□□ 0.52
ZNF550-207ENST00000595560 RBM47A0AV96 593 aaKnown RBP18.31■□□□□ 0.52
ZNF550-207ENST00000595560 CTAGE5O15320 804 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 SMPD1P17405 629 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 SYN1P17600 705 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 HSPA4P34932 840 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 HSD17B4P51659 736 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 EXOSC10Q01780 885 aaKnown RBP18.31■□□□□ 0.52
ZNF550-207ENST00000595560 KCNA10Q16322 511 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 NOL8Q76FK4 1167 aaKnown RBP18.31■□□□□ 0.52
ZNF550-207ENST00000595560 DHX32Q7L7V1 743 aaKnown RBP18.31■□□□□ 0.52
ZNF550-207ENST00000595560 TLK2Q86UE8 772 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 SAMD3Q8N6K7 520 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 MAP3K20Q9NYL2 800 aaKnown RBP18.31■□□□□ 0.52
ZNF550-207ENST00000595560 COL20A1Q9P218 1284 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 Q9Y3F1 56 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 SLC12A7Q9Y666 1083 aa18.31■□□□□ 0.52
ZNF550-207ENST00000595560 CFBP00751 764 aa18.3■□□□□ 0.52
ZNF550-207ENST00000595560 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
ZNF550-207ENST00000595560 GNAQP50148 359 aa18.3■□□□□ 0.52
ZNF550-207ENST00000595560 IRX5P78411 483 aaPredicted RBP18.3■□□□□ 0.52
ZNF550-207ENST00000595560 TRIM60Q495X7 471 aa18.3■□□□□ 0.52
ZNF550-207ENST00000595560 DUSP28Q4G0W2 176 aa18.3■□□□□ 0.52
ZNF550-207ENST00000595560 GNASQ5JWF2 1037 aa18.3■□□□□ 0.52
ZNF550-207ENST00000595560 NSUN6Q8TEA1 469 aaKnown RBP18.3■□□□□ 0.52
ZNF550-207ENST00000595560 GDF15Q99988 308 aa18.3■□□□□ 0.52
ZNF550-207ENST00000595560 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
ZNF550-207ENST00000595560 ATP11BQ9Y2G3 1177 aa18.3■□□□□ 0.52
ZNF550-207ENST00000595560 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
ZNF550-207ENST00000595560 ASGR1P07306 291 aa18.29■□□□□ 0.52
ZNF550-207ENST00000595560 APOA5Q6Q788 366 aa18.29■□□□□ 0.52
ZNF550-207ENST00000595560 TAAR1Q96RJ0 339 aa18.29■□□□□ 0.52
ZNF550-207ENST00000595560 IWS1Q96ST2 819 aa18.29■□□□□ 0.52
ZNF550-207ENST00000595560 RMDN3Q96TC7 470 aa18.29■□□□□ 0.52
ZNF550-207ENST00000595560 WDR11Q9BZH6 1224 aa18.29■□□□□ 0.52
ZNF550-207ENST00000595560 AP5M1Q9H0R1 490 aa18.29■□□□□ 0.52
ZNF550-207ENST00000595560 STARD7Q9NQZ5 370 aa18.29■□□□□ 0.52
ZNF550-207ENST00000595560 ELP1O95163 1332 aa18.28■□□□□ 0.52
ZNF550-207ENST00000595560 A0A1W2PPC1 479 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms