RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZDBF2Q9HCK1 2354 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 SCN10AQ9Y5Y9 1956 aa15.15■□□□□ 0.02
SCAF1-202ENST00000595242 MYH7P12883 1935 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 DCXO43602 365 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 PDE6AP16499 860 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 SMPD1P17405 629 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 RFC2P35250 354 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 CNTN2Q02246 1040 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 PTCRAQ6ISU1 281 aaPredicted RBP15.14■□□□□ 0.01
SCAF1-202ENST00000595242 LCORLQ8N3X6 602 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 FTOQ9C0B1 505 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCAF1-202ENST00000595242 RAVER2Q9HCJ3 691 aaKnown RBP15.14■□□□□ 0.01
SCAF1-202ENST00000595242 FBXO40Q9UH90 709 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 CTDP1Q9Y5B0 961 aaPredicted RBP15.14■□□□□ 0.01
SCAF1-202ENST00000595242 ZNF536O15090 1300 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 TNKSO95271 1327 aa15.14■□□□□ 0.01
SCAF1-202ENST00000595242 LCTP09848 1927 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 CYP2D7A0A087X1C5 515 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 POTEB3A0JP26 581 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 LCHNA4D1U4 455 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 ZBED4O75132 1171 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 CHMLP26374 656 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 POTEBQ6S5H4 581 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 CHST13Q8NET6 341 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 PHOX2BQ99453 314 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 ESYT1Q9BSJ8 1104 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 SUGCTQ9HAC7 445 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 ZNF532Q9HCE3 1301 aa15.13■□□□□ 0.01
SCAF1-202ENST00000595242 GRXCR2A6NFK2 248 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 IQCF3P0C7M6 154 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 TSHZ3Q63HK5 1081 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 C16orf86Q6ZW13 317 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 FAM133AQ8N9E0 248 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 ANKS1AQ92625 1134 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 KIFC2Q96AC6 838 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 GPATCH3Q96I76 525 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 ARMT1Q9H993 441 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 SLC38A10Q9HBR0 1119 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 PDGFCQ9NRA1 345 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 HOMER2Q9NSB8 354 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 ECHDC1Q9NTX5 307 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 Q9Y3F1 56 aa15.12■□□□□ 0.01
SCAF1-202ENST00000595242 SPTBN4Q9H254 2564 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 F5H6K3 240 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 PRKAB2O43741 272 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 KLRC3Q07444 240 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 TTF1Q15361 905 aaPredicted RBP15.11■□□□□ 0.01
SCAF1-202ENST00000595242 TMEM63BQ5T3F8 832 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 IQSEC1Q6DN90 963 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 HFE2Q6ZVN8 426 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 ZBED2Q9BTP6 218 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 ATP8A2Q9NTI2 1148 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 MTUS1Q9ULD2 1270 aa15.11■□□□□ 0.01
SCAF1-202ENST00000595242 TECTAO75443 2155 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 TCRBV5S4A2TA0A5A2 114 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 SOWAHBA6NEL2 793 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 ASB14A6NK59 587 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 USP17L12C9JPN9 530 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 USP17L21D6R901 530 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 ST18O60284 1047 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 BAIAP3O94812 1187 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 NDUFB10O96000 172 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 KCNJ6P48051 423 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 RABEP1Q15276 862 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 PUS10Q3MIT2 529 aaKnown RBP15.1■□□□□ 0.01
SCAF1-202ENST00000595242 EEPD1Q7L9B9 569 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 TMCO2Q7Z6W1 182 aaPredicted RBP15.1■□□□□ 0.01
SCAF1-202ENST00000595242 HSCBQ8IWL3 235 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 AMOTL1Q8IY63 956 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 RETREG2Q8NC44 543 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCAF1-202ENST00000595242 DDX49Q9Y6V7 483 aaKnown RBP15.1■□□□□ 0.01
SCAF1-202ENST00000595242 MYO7AQ13402 2215 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 CACNA1AO00555 2505 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 NLRC5Q86WI3 1866 aa15.1■□□□□ 0.01
SCAF1-202ENST00000595242 PITPNM1O00562 1244 aa15.09■□□□□ 0.01
SCAF1-202ENST00000595242 IFIT2P09913 472 aaKnown RBP15.09■□□□□ 0.01
SCAF1-202ENST00000595242 OAZ1P54368 228 aa15.09■□□□□ 0.01
SCAF1-202ENST00000595242 TAPT1Q6NXT6 567 aa15.09■□□□□ 0.01
SCAF1-202ENST00000595242 AACSQ86V21 672 aa15.09■□□□□ 0.01
SCAF1-202ENST00000595242 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCAF1-202ENST00000595242 MFSD14AQ96MC6 490 aa15.09■□□□□ 0.01
SCAF1-202ENST00000595242 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 ERVK-21P61565 698 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 PURAQ00577 322 aaKnown RBP15.08■□□□□ 0
SCAF1-202ENST00000595242 FAM47CQ5HY64 1035 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 FBXO16Q8IX29 292 aaPredicted RBP15.08■□□□□ 0
SCAF1-202ENST00000595242 NEK9Q8TD19 979 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 RILPL2Q969X0 211 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 TGS1Q96RS0 853 aaKnown RBP15.08■□□□□ 0
SCAF1-202ENST00000595242 BCL11AQ9H165 835 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 ACAD9Q9H845 621 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 A1CFQ9NQ94 594 aaKnown RBP15.08■□□□□ 0
SCAF1-202ENST00000595242 POLR3EQ9NVU0 708 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 MICAL3Q7RTP6 2002 aa15.08■□□□□ 0
SCAF1-202ENST00000595242 H3BQ06 376 aaPredicted RBP15.07■□□□□ 0
SCAF1-202ENST00000595242 MBD4O95243 580 aa15.07■□□□□ 0
SCAF1-202ENST00000595242 MYL3P08590 195 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms