RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-240	ENST00000592815	WDR19	Q8NEZ3	1342 aa		18.83	■□□□□ 0.61
CIRBP-240	ENST00000592815	ZEB2	O60315	1214 aa		18.83	■□□□□ 0.6
CIRBP-240	ENST00000592815	RPS6	P62753	249 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-240	ENST00000592815	USH1G	Q495M9	461 aa		18.83	■□□□□ 0.6
CIRBP-240	ENST00000592815	ENAH	Q8N8S7	591 aa	Predicted RBP	18.83	■□□□□ 0.6
CIRBP-240	ENST00000592815	RNPC3	Q96LT9	517 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-240	ENST00000592815	IL25	Q9H293	177 aa		18.83	■□□□□ 0.6
CIRBP-240	ENST00000592815	LAMA2	P24043	3122 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-240	ENST00000592815	LOC102724159	A0A0B4J2E5	919 aa		18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	TLR3	O15455	904 aa	Known RBP	18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	CABYR	O75952	493 aa		18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	GSPT1	P15170	499 aa	Known RBP	18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	PWP2	Q15269	919 aa	Known RBP	18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	DUSP28	Q4G0W2	176 aa		18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	FAM126B	Q8IXS8	530 aa		18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	WDR11	Q9BZH6	1224 aa		18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	CNNM2	Q9H8M5	875 aa		18.82	■□□□□ 0.6
CIRBP-240	ENST00000592815	TNKS	O95271	1327 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	SMAD3	P84022	425 aa	Known RBP	18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	PDE4D	Q08499	809 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	ITGA7	Q13683	1181 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	ZNF697	Q5TEC3	545 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	MFSD5	Q6N075	450 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	ADGRF4	Q8IZF3	695 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	UBAC1	Q9BSL1	405 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	VAT1L	Q9HCJ6	419 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	COL6A3	P12111	3177 aa		18.81	■□□□□ 0.6
CIRBP-240	ENST00000592815	DHX16	O60231	1041 aa	Known RBP	18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	PARP1	P09874	1014 aa	Known RBP	18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	CDC37	Q16543	378 aa	Predicted RBP	18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	ASPRV1	Q53RT3	343 aa		18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	SLC43A3	Q8NBI5	491 aa		18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	RGS22	Q8NE09	1264 aa		18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	GUCD1	Q96NT3	240 aa		18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	MPHOSPH6	Q99547	160 aa	Known RBP	18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	PPP1R12C	Q9BZL4	782 aa		18.8	■□□□□ 0.6
CIRBP-240	ENST00000592815	GRIN2D	O15399	1336 aa		18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	RBM47	A0AV96	593 aa	Known RBP	18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	CD4	P01730	458 aa		18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	PSMC6	P62333	389 aa		18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	IFIT1B	Q5T764	474 aa	Known RBP	18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	TMEM199	Q8N511	208 aa		18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	DNER	Q8NFT8	737 aa		18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	RUFY2	Q8WXA3	655 aa		18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	TBC1D5	Q92609	795 aa		18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815	SEMA6B	Q9H3T3	888 aa		18.79	■□□□□ 0.6
CIRBP-240	ENST00000592815		B4DLN1	442 aa		18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	CSF2RA	P15509	400 aa		18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	CHML	P26374	656 aa		18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	CYP2C18	P33260	490 aa		18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	MRPL12	P52815	198 aa	Known RBP	18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	PPIG	Q13427	754 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	1e-8	■■□□□ 11.5
CIRBP-240	ENST00000592815	CYB5R4	Q7L1T6	521 aa		18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	C16orf59	Q7L2K0	433 aa		18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	1e-9	■■□□□ 13.2
CIRBP-240	ENST00000592815	TRPV6	Q9H1D0	765 aa		18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	JMJD4	Q9H9V9	463 aa		18.78	■□□□□ 0.6
CIRBP-240	ENST00000592815	ABCB11	O95342	1321 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	MYL3	P08590	195 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	EDNRB	P24530	442 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	PTH1R	Q03431	593 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	TRDN	Q13061	729 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	QRICH1	Q2TAL8	776 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	FBXO11	Q86XK2	927 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	OR6J1	Q8NGC5	347 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	SEZ6L	Q9BYH1	1024 aa		18.77	■□□□□ 0.6
CIRBP-240	ENST00000592815	RAD50	Q92878	1312 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	ACR	P10323	421 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	CPT1A	P50416	773 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	PPP2R5B	Q15173	497 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	SEC23A	Q15436	765 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	TMEM240	Q5SV17	173 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	MCF2L2	Q86YR7	1114 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	STAG2	Q8N3U4	1231 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	SCFD2	Q8WU76	684 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	TAAR1	Q96RJ0	339 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	CDX2	Q99626	313 aa	Predicted RBP	18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	HIPK3	Q9H422	1215 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	GPHN	Q9NQX3	736 aa	Predicted RBP	18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	POLR3E	Q9NVU0	708 aa		18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	MRPL11	Q9Y3B7	192 aa	Known RBP	18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815		U3KPZ7	1027 aa	Predicted RBP	18.76	■□□□□ 0.59
CIRBP-240	ENST00000592815	KLRF2	D3W0D1	207 aa		18.75	■□□□□ 0.59
CIRBP-240	ENST00000592815	NKRF	O15226	690 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
CIRBP-240	ENST00000592815	B4GALT4	O60513	344 aa		18.75	■□□□□ 0.59
CIRBP-240	ENST00000592815	TXN	P10599	105 aa	Known RBP	18.75	■□□□□ 0.59
CIRBP-240	ENST00000592815	ZNF365	Q70YC5	407 aa		18.75	■□□□□ 0.59
CIRBP-240	ENST00000592815	COPS5	Q92905	334 aa		18.75	■□□□□ 0.59
CIRBP-240	ENST00000592815	MAF1	Q9H063	256 aa		18.75	■□□□□ 0.59
CIRBP-240	ENST00000592815	TTYH1	Q9H313	450 aa	Predicted RBP	18.75	■□□□□ 0.59
CIRBP-240	ENST00000592815	LCT	P09848	1927 aa		18.74	■□□□□ 0.59
CIRBP-240	ENST00000592815	CYP21A2	P08686	494 aa		18.74	■□□□□ 0.59
CIRBP-240	ENST00000592815	PURA	Q00577	322 aa	Known RBP	18.74	■□□□□ 0.59
CIRBP-240	ENST00000592815	BRDT	Q58F21	947 aa	Predicted RBP	18.74	■□□□□ 0.59
CIRBP-240	ENST00000592815	NSUN6	Q8TEA1	469 aa	Known RBP	18.74	■□□□□ 0.59
CIRBP-240	ENST00000592815	MTG1	Q9BT17	334 aa	Predicted RBP	18.74	■□□□□ 0.59
CIRBP-240	ENST00000592815	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms