RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 DNAH12Q6ZR08 3092 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 ABCB11O95342 1321 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 LOC102724159A0A0B4J2E5 919 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 PALM3A6NDB9 673 aaPredicted RBP16.18■□□□□ 0.18
APOC1-208ENST00000592535 KLRF2D3W0D1 207 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 ASGR1P07306 291 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 NKX3-2P78367 333 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 WTAPQ15007 396 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 PWP2Q15269 919 aaKnown RBP16.18■□□□□ 0.18
APOC1-208ENST00000592535 GNASQ5JWF2 1037 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 IQSEC1Q6DN90 963 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 TLK2Q86UE8 772 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 FBXO11Q86XK2 927 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 TDHQ8IZJ6 230 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 NUP133Q8WUM0 1156 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 TBC1D5Q92609 795 aa16.18■□□□□ 0.18
APOC1-208ENST00000592535 LBHD1Q9BQE6 289 aaPredicted RBP16.18■□□□□ 0.18
APOC1-208ENST00000592535 RANBP2P49792 3224 aaKnown RBP16.18■□□□□ 0.18
APOC1-208ENST00000592535 TRIM43BA6NCK2 446 aa16.17■□□□□ 0.18
APOC1-208ENST00000592535 PQBP1O60828 265 aaKnown RBP16.17■□□□□ 0.18
APOC1-208ENST00000592535 GRM4Q14833 912 aa16.17■□□□□ 0.18
APOC1-208ENST00000592535 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
APOC1-208ENST00000592535 SLC35G1Q2M3R5 365 aa16.17■□□□□ 0.18
APOC1-208ENST00000592535 TMEM67Q5HYA8 995 aa16.17■□□□□ 0.18
APOC1-208ENST00000592535 RGS22Q8NE09 1264 aa16.17■□□□□ 0.18
APOC1-208ENST00000592535 IGDCC4Q8TDY8 1250 aa16.17■□□□□ 0.18
APOC1-208ENST00000592535 TRIM43Q96BQ3 446 aaPredicted RBP16.17■□□□□ 0.18
APOC1-208ENST00000592535 GLT1D1Q96MS3 346 aa16.17■□□□□ 0.18
APOC1-208ENST00000592535 SLC27A2O14975 620 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 DYNC1LI2O43237 492 aaPredicted RBP16.16■□□□□ 0.18
APOC1-208ENST00000592535 CLTBP09497 229 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 EDNRBP24530 442 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 PDE4DQ08499 809 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 DNERQ8NFT8 737 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 LRCH3Q96II8 777 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 AP5M1Q9H0R1 490 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
APOC1-208ENST00000592535 COL20A1Q9P218 1284 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 MRPL11Q9Y3B7 192 aaKnown RBP16.16■□□□□ 0.18
APOC1-208ENST00000592535 ELP1O95163 1332 aa16.16■□□□□ 0.18
APOC1-208ENST00000592535 KIAA1217Q5T5P2 1943 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 PPP1R11O60927 126 aaPredicted RBP16.15■□□□□ 0.18
APOC1-208ENST00000592535 TROAPQ12815 778 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 COL9A3Q14050 684 aaPredicted RBP16.15■□□□□ 0.18
APOC1-208ENST00000592535 NECTIN1Q15223 517 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 FSCN1Q16658 493 aaKnown RBP16.15■□□□□ 0.18
APOC1-208ENST00000592535 DUSP28Q4G0W2 176 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 ANKRD33Q7Z3H0 272 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 SYTL5Q8TDW5 730 aaPredicted RBP16.15■□□□□ 0.18
APOC1-208ENST00000592535 BADQ92934 168 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 VTI1AQ96AJ9 217 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 CCDC136Q96JN2 1154 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 TAAR1Q96RJ0 339 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
APOC1-208ENST00000592535 AMNQ9BXJ7 453 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 WDR11Q9BZH6 1224 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 Q9Y3F1 56 aa16.15■□□□□ 0.18
APOC1-208ENST00000592535 A0A0U1RQG5 324 aaPredicted RBP16.14■□□□□ 0.17
APOC1-208ENST00000592535 RBM47A0AV96 593 aaKnown RBP16.14■□□□□ 0.17
APOC1-208ENST00000592535 ZBTB5O15062 677 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 PRC1O43663 620 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 ITGB8P26012 769 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 CDK7P50613 346 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 FAAP100Q0VG06 881 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 CXCL17Q6UXB2 119 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 CATIPQ7Z7H3 387 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 HOMER1Q86YM7 354 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 MCF2L2Q86YR7 1114 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 TOX2Q96NM4 488 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 PIGSQ96S52 555 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 MAF1Q9H063 256 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 RIOX1Q9H6W3 641 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 LY9Q9HBG7 655 aa16.14■□□□□ 0.17
APOC1-208ENST00000592535 DCDC2CA8MYV0 355 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 ARVCFO00192 962 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 OPLAHO14841 1288 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 CYTH3O43739 400 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 LRIT3Q3SXY7 679 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 ZNF654Q8IZM8 581 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 MYL10Q9BUA6 226 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 TMEM39AQ9NV64 488 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 PCDHA1Q9Y5I3 950 aa16.13■□□□□ 0.17
APOC1-208ENST00000592535 B4DLN1 442 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
APOC1-208ENST00000592535 ZEB2O60315 1214 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 CDC45O75419 566 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 CFBP00751 764 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 MCM5P33992 734 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 MRPL12P52815 198 aaKnown RBP16.12■□□□□ 0.17
APOC1-208ENST00000592535 CASC1Q6TDU7 716 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 NSUN6Q8TEA1 469 aaKnown RBP16.12■□□□□ 0.17
APOC1-208ENST00000592535 SCFD2Q8WU76 684 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 RMDN3Q96TC7 470 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 MTA3Q9BTC8 594 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 MROH7Q68CQ1 1323 aa16.12■□□□□ 0.17
APOC1-208ENST00000592535 CABYRO75952 493 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms