RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 ACTN1P12814 892 aa23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 PPP4R3BQ5MIZ7 849 aa23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 TSHZ3Q63HK5 1081 aa23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 PURBQ96QR8 312 aaKnown RBP23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 POLR3EQ9NVU0 708 aa23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 CCPG1Q9ULG6 757 aa23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 STX8Q9UNK0 236 aa23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 MTCH2Q9Y6C9 303 aa23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 LRRC37A2A6NM11 1700 aa23.28■■□□□ 1.32
PRKCSH-216ENST00000592445 PLA2G6O60733 806 aa23.27■■□□□ 1.32
PRKCSH-216ENST00000592445 MYL3P08590 195 aa23.27■■□□□ 1.32
PRKCSH-216ENST00000592445 LRRFIP1Q32MZ4 808 aaKnown RBP23.27■■□□□ 1.32
PRKCSH-216ENST00000592445 DUSP28Q4G0W2 176 aa23.27■■□□□ 1.32
PRKCSH-216ENST00000592445 RCSD1Q6JBY9 416 aa23.27■■□□□ 1.32
PRKCSH-216ENST00000592445 NAPBQ9H115 298 aa23.27■■□□□ 1.32
PRKCSH-216ENST00000592445 GPHNQ9NQX3 736 aaPredicted RBP23.27■■□□□ 1.32
PRKCSH-216ENST00000592445 PRR12Q9ULL5 1215 aa23.27■■□□□ 1.32
PRKCSH-216ENST00000592445 CPT1AP50416 773 aa23.26■■□□□ 1.31
PRKCSH-216ENST00000592445 PPARAQ07869 468 aa23.26■■□□□ 1.31
PRKCSH-216ENST00000592445 FAM47CQ5HY64 1035 aa23.26■■□□□ 1.31
PRKCSH-216ENST00000592445 WDR11Q9BZH6 1224 aa23.26■■□□□ 1.31
PRKCSH-216ENST00000592445 ADD3Q9UEY8 706 aaKnown RBP23.26■■□□□ 1.31
PRKCSH-216ENST00000592445 MTMR7Q9Y216 660 aa23.26■■□□□ 1.31
PRKCSH-216ENST00000592445 POU3F3P20264 500 aaPredicted RBP23.25■■□□□ 1.31
PRKCSH-216ENST00000592445 ARNTL2Q8WYA1 636 aa23.25■■□□□ 1.31
PRKCSH-216ENST00000592445 SLC9A7Q96T83 725 aa23.25■■□□□ 1.31
PRKCSH-216ENST00000592445 TSPY2A6NKD2 308 aa23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 RFC2P35250 354 aa23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 PURAQ00577 322 aaKnown RBP23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 RETREG2Q8NC44 543 aa23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 OR6J1Q8NGC5 347 aa23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 MORC4Q8TE76 937 aa23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 MTG1Q9BT17 334 aaPredicted RBP23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 FTOQ9C0B1 505 aaKnown RBP eCLIP23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 COG5Q9UP83 839 aa23.24■■□□□ 1.31
PRKCSH-216ENST00000592445 KIF28PB7ZC32 967 aa23.23■■□□□ 1.31
PRKCSH-216ENST00000592445 ICAM1P05362 532 aa23.23■■□□□ 1.31
PRKCSH-216ENST00000592445 BAATQ14032 418 aaPredicted RBP23.23■■□□□ 1.31
PRKCSH-216ENST00000592445 CCDC96Q2M329 555 aa23.23■■□□□ 1.31
PRKCSH-216ENST00000592445 BRDTQ58F21 947 aaPredicted RBP23.23■■□□□ 1.31
PRKCSH-216ENST00000592445 PHOSPHO2Q8TCD6 241 aa23.23■■□□□ 1.31
PRKCSH-216ENST00000592445 SEC62Q99442 399 aaKnown RBP23.23■■□□□ 1.31
PRKCSH-216ENST00000592445 EPOPA6NHQ4 379 aa23.22■■□□□ 1.31
PRKCSH-216ENST00000592445 ALDH5A1P51649 535 aaPredicted RBP23.22■■□□□ 1.31
PRKCSH-216ENST00000592445 KRT40Q6A162 431 aa23.22■■□□□ 1.31
PRKCSH-216ENST00000592445 RASGRP2Q7LDG7 609 aa23.22■■□□□ 1.31
PRKCSH-216ENST00000592445 HCN4Q9Y3Q4 1203 aa23.22■■□□□ 1.31
PRKCSH-216ENST00000592445 PRRC2BQ5JSZ5 2229 aaKnown RBP23.22■■□□□ 1.31
PRKCSH-216ENST00000592445 PTPDC1A2A3K4 754 aa23.21■■□□□ 1.31
PRKCSH-216ENST00000592445 NMT2O60551 498 aa23.21■■□□□ 1.31
PRKCSH-216ENST00000592445 TAP1Q03518 808 aa23.21■■□□□ 1.31
PRKCSH-216ENST00000592445 NBPF20Q3BBV1 942 aa23.21■■□□□ 1.31
PRKCSH-216ENST00000592445 HERC6Q8IVU3 1022 aa23.21■■□□□ 1.31
PRKCSH-216ENST00000592445 EPHX3Q9H6B9 360 aa23.21■■□□□ 1.31
PRKCSH-216ENST00000592445 IL17RBQ9NRM6 502 aa23.21■■□□□ 1.31
PRKCSH-216ENST00000592445 RAD50Q92878 1312 aa23.21■■□□□ 1.31
PRKCSH-216ENST00000592445 IQCF3P0C7M6 154 aa23.2■■□□□ 1.3
PRKCSH-216ENST00000592445 PPP1R13LQ8WUF5 828 aa23.2■■□□□ 1.3
PRKCSH-216ENST00000592445 HLA-CQ95604 372 aa23.2■■□□□ 1.3
PRKCSH-216ENST00000592445 LRFN3Q9BTN0 628 aa23.2■■□□□ 1.3
PRKCSH-216ENST00000592445 RANBP17Q9H2T7 1088 aaKnown RBP23.2■■□□□ 1.3
PRKCSH-216ENST00000592445 NOD1Q9Y239 953 aa23.2■■□□□ 1.3
PRKCSH-216ENST00000592445 LOC102724159A0A0B4J2E5 919 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 RBM47A0AV96 593 aaKnown RBP23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 PITPNM1O00562 1244 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 NFIBO00712 420 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 RANBP6O60518 1105 aaKnown RBP23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 SLC16A2P36021 539 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 BFSP2Q13515 415 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 PWP2Q15269 919 aaKnown RBP23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 NFRKBQ6P4R8 1299 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 DCAF4Q8WV16 495 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 MPHOSPH6Q99547 160 aaKnown RBP23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 FSD1Q9BTV5 496 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 INCENPQ9NQS7 918 aa23.19■■□□□ 1.3
PRKCSH-216ENST00000592445 SCN5AQ14524 2016 aa23.18■■□□□ 1.3
PRKCSH-216ENST00000592445 KPNA6O60684 536 aa23.18■■□□□ 1.3
PRKCSH-216ENST00000592445 CALML3P27482 149 aa23.18■■□□□ 1.3
PRKCSH-216ENST00000592445 CHMP4BP1P59074 171 aa23.18■■□□□ 1.3
PRKCSH-216ENST00000592445 CTDSPL2Q05D32 466 aa23.18■■□□□ 1.3
PRKCSH-216ENST00000592445 PDE4DQ08499 809 aa23.18■■□□□ 1.3
PRKCSH-216ENST00000592445 PPP2R5BQ15173 497 aa23.18■■□□□ 1.3
PRKCSH-216ENST00000592445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.18■■□□□ 1.3
PRKCSH-216ENST00000592445 TLL1O43897 1013 aa23.17■■□□□ 1.3
PRKCSH-216ENST00000592445 ARHGEF15O94989 841 aa23.17■■□□□ 1.3
PRKCSH-216ENST00000592445 HOXD11P31277 338 aaPredicted RBP23.17■■□□□ 1.3
PRKCSH-216ENST00000592445 GRB10Q13322 594 aa23.17■■□□□ 1.3
PRKCSH-216ENST00000592445 TMEM31Q5JXX7 168 aa23.17■■□□□ 1.3
PRKCSH-216ENST00000592445 SYDE2Q5VT97 1194 aa23.17■■□□□ 1.3
PRKCSH-216ENST00000592445 TTBK2Q6IQ55 1244 aa23.17■■□□□ 1.3
PRKCSH-216ENST00000592445 LCTP09848 1927 aa23.17■■□□□ 1.3
PRKCSH-216ENST00000592445 NKRFO15226 690 aaKnown RBP eCLIP23.16■■□□□ 1.3
PRKCSH-216ENST00000592445 BAIAP3O94812 1187 aa23.16■■□□□ 1.3
PRKCSH-216ENST00000592445 KCNJ6P48051 423 aa23.16■■□□□ 1.3
PRKCSH-216ENST00000592445 PTPN11Q06124 597 aaPredicted RBP23.16■■□□□ 1.3
PRKCSH-216ENST00000592445 SLC30A10Q6XR72 485 aa23.16■■□□□ 1.3
PRKCSH-216ENST00000592445 SCFD2Q8WU76 684 aa23.16■■□□□ 1.3
PRKCSH-216ENST00000592445 DCTPP1Q9H773 170 aa23.16■■□□□ 1.3
PRKCSH-216ENST00000592445 ARIH1Q9Y4X5 557 aaPredicted RBP23.16■■□□□ 1.3
PRKCSH-216ENST00000592445 A6NJR5 290 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms