RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 RALYLQ86SE5 291 aaKnown RBP11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 TLK2Q86UE8 772 aa11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 NCOA7Q8NI08 942 aa11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 MPHOSPH6Q99547 160 aaKnown RBP11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 JMJD4Q9H9V9 463 aa11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 PRDM5Q9NQX1 630 aaPredicted RBP11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 PDGFCQ9NRA1 345 aa11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 ABCB11O95342 1321 aa11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 MROH7Q68CQ1 1323 aa11.32□□□□□ -0.6
PRKCSH-215ENST00000592435 SZT2Q5T011 3432 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 DYNC1LI2O43237 492 aaPredicted RBP11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 ZEB2O60315 1214 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 PQBP1O60828 265 aaKnown RBP11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 CABYRO75952 493 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 EDNRBP24530 442 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 FAAP100Q0VG06 881 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 QRICH1Q2TAL8 776 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 USH1GQ495M9 461 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 DUSP28Q4G0W2 176 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 FBXO11Q86XK2 927 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 BADQ92934 168 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 VTI1AQ96AJ9 217 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 MTMR8Q96EF0 704 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 SEZ6LQ9BYH1 1024 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 WDR11Q9BZH6 1224 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 VAT1LQ9HCJ6 419 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 TMEM39AQ9NV64 488 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 MAD2L2Q9UI95 211 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 MRPL11Q9Y3B7 192 aaKnown RBP11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 TAF6LQ9Y6J9 622 aa11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
PRKCSH-215ENST00000592435 LAMA3Q16787 3333 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 A0A0U1RQG5 324 aaPredicted RBP11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 ARVCFO00192 962 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 DHX16O60231 1041 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 BEX3Q00994 111 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 PDE4DQ08499 809 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 TROAPQ12815 778 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 TRAF1Q13077 416 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 BMP2KLQ5H9B9 411 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 SLC43A3Q8NBI5 491 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 IGDCC4Q8TDY8 1250 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 MTA3Q9BTC8 594 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 AMNQ9BXJ7 453 aa11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 MAP3K20Q9NYL2 800 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 RBM8AQ9Y5S9 174 aaKnown RBP11.3□□□□□ -0.6
PRKCSH-215ENST00000592435 ZBTB5O15062 677 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 NKRFO15226 690 aaKnown RBP eCLIP11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 RAG1P15918 1043 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 ITGB8P26012 769 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 GRM4Q14833 912 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 WTAPQ15007 396 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 TMEM67Q5HYA8 995 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 TMEM63BQ5T3F8 832 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 CXCL17Q6UXB2 119 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 STOX1Q6ZVD7 989 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 SAMD3Q8N6K7 520 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 NSUN6Q8TEA1 469 aaKnown RBP11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 SCFD2Q8WU76 684 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 TBC1D5Q92609 795 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 IWS1Q96ST2 819 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 MAP3K14Q99558 947 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 LSG1Q9H089 658 aaKnown RBP11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 RIOX1Q9H6W3 641 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 TBX21Q9UL17 535 aa11.29□□□□□ -0.6
PRKCSH-215ENST00000592435 TLR3O15455 904 aaKnown RBP11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 TIMP1P01033 207 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 CD4P01730 458 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 CPT1AP50416 773 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 ANTXR2P58335 489 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 GHRHRQ02643 423 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 ITGA7Q13683 1181 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 NECTIN1Q15223 517 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 SHHQ15465 462 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 CATIPQ7Z7H3 387 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 FAM126BQ8IXS8 530 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 MB21D2Q8IYB1 491 aaPredicted RBP11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 TMTC2Q8N394 836 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 TAAR1Q96RJ0 339 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 RMDN3Q96TC7 470 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 PCDHA1Q9Y5I3 950 aa11.28□□□□□ -0.6
PRKCSH-215ENST00000592435 PNMA6FA0A0J9YX94 578 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 KPNA6O60684 536 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 PPP1R11O60927 126 aaPredicted RBP11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 CFBP00751 764 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 TXNP10599 105 aaKnown RBP11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 PTGS1P23219 599 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 MCM5P33992 734 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 HSD17B4P51659 736 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms