RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 PRKAG3Q9UGI9 489 aa5.91□□□□□ -1.46
TPM4-214ENST00000591645 SUGT1Q9Y2Z0 365 aa5.91□□□□□ -1.46
TPM4-214ENST00000591645 IRS2Q9Y4H2 1338 aa5.91□□□□□ -1.46
TPM4-214ENST00000591645 C2orf71A6NGG8 1288 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 SMAD7O15105 426 aaKnown RBP5.9□□□□□ -1.46
TPM4-214ENST00000591645 FOXD2O60548 495 aaPredicted RBP5.9□□□□□ -1.46
TPM4-214ENST00000591645 VAMP4O75379 141 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 SSBP05455 408 aaKnown RBP eCLIP5.9□□□□□ -1.46
TPM4-214ENST00000591645 FGRP09769 529 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 SEPHS1P49903 392 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 ZC3H14Q6PJT7 736 aaKnown RBP5.9□□□□□ -1.46
TPM4-214ENST00000591645 LDHDQ86WU2 507 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 IGDCC3Q8IVU1 814 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 MARCH10Q8NA82 808 aaPredicted RBP5.9□□□□□ -1.46
TPM4-214ENST00000591645 BVESQ8NE79 360 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 COPS5Q92905 334 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 ACTR10Q9NZ32 417 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 AKT3Q9Y243 479 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 PCDHA5Q9Y5H7 936 aa5.9□□□□□ -1.46
TPM4-214ENST00000591645 TRIM13O60858 407 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 GLI4P10075 376 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 PAMP19021 973 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 PI3P19957 117 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 FBLN1P23142 703 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 IGFBP6P24592 240 aaPredicted RBP5.89□□□□□ -1.47
TPM4-214ENST00000591645 DPY19L1Q2PZI1 675 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 TCERG1LQ5VWI1 586 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 TRIM59Q8IWR1 403 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 PANK1Q8TE04 598 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 DACT3Q96B18 629 aaPredicted RBP5.89□□□□□ -1.47
TPM4-214ENST00000591645 MRGPRX3Q96LB0 322 aa5.89□□□□□ -1.47
TPM4-214ENST00000591645 ADAMTS20P59510 1910 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 A0A1W2PQJ5 194 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 BICRALQ6AI39 1079 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 FAM178BQ8IXR5 827 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 TMEFF1Q8IYR6 380 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 SLC43A3Q8NBI5 491 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 NETO2Q8NC67 525 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 MMP19Q99542 508 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 EPB41L4AQ9HCS5 686 aaPredicted RBP5.88□□□□□ -1.47
TPM4-214ENST00000591645 IGSF5Q9NSI5 407 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 JAG2Q9Y219 1238 aa5.88□□□□□ -1.47
TPM4-214ENST00000591645 NPHP3-ACAD11A0A0J9YXS1 232 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 NOP56O00567 594 aaKnown RBP5.87□□□□□ -1.47
TPM4-214ENST00000591645 KCNH1O95259 989 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 CAP1Q01518 475 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 ARID5AQ03989 594 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 C6orf15Q6UXA7 325 aaPredicted RBP5.87□□□□□ -1.47
TPM4-214ENST00000591645 CABP7Q86V35 215 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 LZTR1Q8N653 840 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 ZNF428Q96B54 188 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 GMLQ99445 158 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.87□□□□□ -1.477e-6■□□□□ 9.4
TPM4-214ENST00000591645 MTA3Q9BTC8 594 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 RNF38Q9H0F5 515 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 NKX2-4Q9H2Z4 354 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 CYP26B1Q9NR63 512 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 MRVI1Q9Y6F6 885 aa5.87□□□□□ -1.47
TPM4-214ENST00000591645 NPHS1O60500 1241 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 PFKLP17858 780 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 TACR1P25103 407 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 ETFBP38117 255 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 SCRN1Q12765 414 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 TARBP2Q15633 366 aaKnown RBP5.86□□□□□ -1.47
TPM4-214ENST00000591645 FXNQ16595 210 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 GTF2IRD2BQ6EKJ0 949 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 GTF2IRD2Q86UP8 949 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 FAM129CQ86XR2 697 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 MCF2L2Q86YR7 1114 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 TSPAN17Q96FV3 270 aa5.86□□□□□ -1.47
TPM4-214ENST00000591645 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.86□□□□□ -1.474e-8■□□□□ 10.4
TPM4-214ENST00000591645 SUSD5O60279 629 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 AFF3P51826 1226 aaKnown RBP5.85□□□□□ -1.47
TPM4-214ENST00000591645 ZNF200P98182 395 aaPredicted RBP5.85□□□□□ -1.47
TPM4-214ENST00000591645 NFIXQ14938 502 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 TESK1Q15569 626 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 LARP1BQ659C4 914 aaKnown RBP5.85□□□□□ -1.47
TPM4-214ENST00000591645 CNKSR3Q6P9H4 555 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 ZNF227Q86WZ6 799 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 NPLOC4Q8TAT6 608 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 XYLT2Q9H1B5 865 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 ZNF408Q9H9D4 720 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 FBLN5Q9UBX5 448 aa5.85□□□□□ -1.47
TPM4-214ENST00000591645 C7orf72A4D263 438 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 B2RBV5 119 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 F8W031 263 aaPredicted RBP5.84□□□□□ -1.47
TPM4-214ENST00000591645 BUB1BO60566 1050 aaPredicted RBP5.84□□□□□ -1.47
TPM4-214ENST00000591645 PPP1R11O60927 126 aaPredicted RBP5.84□□□□□ -1.47
TPM4-214ENST00000591645 SCG5P05408 212 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 THBDP07204 575 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 PLS3P13797 630 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 SYN1P17600 705 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 PRR5P85299 388 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 CYP4F3Q08477 520 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 SLC9A5Q14940 896 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 E4F1Q66K89 784 aaPredicted RBP5.84□□□□□ -1.47
TPM4-214ENST00000591645 MRM1Q6IN84 353 aaKnown RBP5.84□□□□□ -1.47
TPM4-214ENST00000591645 CPNE8Q86YQ8 564 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 PEX11GQ96HA9 241 aa5.84□□□□□ -1.47
TPM4-214ENST00000591645 EPN3Q9H201 632 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms