RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 H7C1D1 291 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
VPS25-206ENST00000591584 RHOBTB3O94955 611 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 CAP2P40123 477 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 TECP42680 631 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 STAT2P52630 851 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 CUL4BQ13620 913 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 COBLL1Q53SF7 1204 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 NAALADL2Q58DX5 795 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 CNNM4Q6P4Q7 775 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 SV2BQ7L1I2 683 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 VSTM4Q8IW00 320 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 GRAMD1CQ8IYS0 662 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 SAMD3Q8N6K7 520 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 DHTKD1Q96HY7 919 aaPredicted RBP11.69□□□□□ -0.54
VPS25-206ENST00000591584 CDK5RAP3Q96JB5 506 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 VCPKMTQ9H867 229 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 EHMT1Q9H9B1 1298 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 VEZTQ9HBM0 779 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
VPS25-206ENST00000591584 FEM1BQ9UK73 627 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
VPS25-206ENST00000591584 RABGAP1Q9Y3P9 1069 aa11.69□□□□□ -0.54
VPS25-206ENST00000591584 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
VPS25-206ENST00000591584 KDM3AQ9Y4C1 1321 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 LRRC10BA6NIK2 292 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 SPDYE3A6NKU9 549 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 FAM196BA6NMK8 535 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 WNT10BO00744 389 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 RAD21O60216 631 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 ZBTB7AO95365 584 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 SFPQP23246 707 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS25-206ENST00000591584 TXKP42681 527 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
VPS25-206ENST00000591584 PAK1Q13153 545 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 TPD52L1Q16890 204 aaPredicted RBP11.68□□□□□ -0.54
VPS25-206ENST00000591584 Q4G0T1 1027 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 TMC6Q7Z403 805 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 CACTINQ8WUQ7 758 aaKnown RBP11.68□□□□□ -0.54
VPS25-206ENST00000591584 PRIMPOLQ96LW4 560 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 ANO3Q9BYT9 981 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 PGAP2Q9UHJ9 254 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 PCDHA12Q9UN75 941 aa11.68□□□□□ -0.54
VPS25-206ENST00000591584 MRPL11Q9Y3B7 192 aaKnown RBP11.68□□□□□ -0.54
VPS25-206ENST00000591584 SYNRGQ9UMZ2 1314 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 BICDL2A1A5D9 508 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
VPS25-206ENST00000591584 FZD9O00144 591 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 MEIS2O14770 477 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 PSMA7O14818 248 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 CYP3A4P08684 503 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 FDX1P10109 184 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 SKILP12757 684 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 CIITAP33076 1130 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS25-206ENST00000591584 PSMD2Q13200 908 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 NR1I3Q14994 352 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 DNTTIP2Q5QJE6 756 aaKnown RBP11.67□□□□□ -0.54
VPS25-206ENST00000591584 HYIQ5T013 277 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 FOXR2Q6PJQ5 311 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 GIMAP8Q8ND71 665 aaPredicted RBP11.67□□□□□ -0.54
VPS25-206ENST00000591584 LPAR1Q92633 364 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 FAM20AQ96MK3 541 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 MTRQ99707 1265 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
VPS25-206ENST00000591584 MAP3K20Q9NYL2 800 aaKnown RBP11.67□□□□□ -0.54
VPS25-206ENST00000591584 PRR12Q9ULL5 1215 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 EP400Q96L91 3159 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 SIPA1L1O43166 1804 aa11.67□□□□□ -0.54
VPS25-206ENST00000591584 ABCB11O95342 1321 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 A0A1B0GTH6 734 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 A0A1W2PRG0 241 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
VPS25-206ENST00000591584 TPM2P07951 284 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 PLCG1P19174 1290 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 SREBF1P36956 1147 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
VPS25-206ENST00000591584 UBE2SQ16763 222 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 CDKAL1Q5VV42 579 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 HAUS3Q68CZ6 603 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 ADSSL1Q8N142 457 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 ERMNQ8TAM6 284 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 MMTAG2Q9BU76 263 aaKnown RBP11.66□□□□□ -0.54
VPS25-206ENST00000591584 TRIM9Q9C026 710 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 DEFB129Q9H1M3 183 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 BLZF1Q9H2G9 400 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 RANBP17Q9H2T7 1088 aaKnown RBP11.66□□□□□ -0.54
VPS25-206ENST00000591584 KCNMB3Q9NPA1 279 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 ADAMTSL1Q8N6G6 1762 aa11.66□□□□□ -0.54
VPS25-206ENST00000591584 MYH4Q9Y623 1939 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 NFKBIEO00221 500 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 SLC37A4O43826 429 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms