RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 EPHB4P54760 987 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 LETM2Q2VYF4 491 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 CCDC170Q8IYT3 715 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 HYOU1Q9Y4L1 999 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 KLRC4O43908 158 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 HEXIM1O94992 359 aaKnown RBP12.14□□□□□ -0.47
LINC01140-210ENST00000590653 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 MAP2K2P36507 400 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 SETQ01105 290 aaPredicted RBP12.14□□□□□ -0.47
LINC01140-210ENST00000590653 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 CCDC91Q7Z6B0 441 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 CCDC47Q96A33 483 aaKnown RBP12.14□□□□□ -0.47
LINC01140-210ENST00000590653 KRT12Q99456 494 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 NUP58Q9BVL2 599 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 VAT1LQ9HCJ6 419 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 TJP1Q07157 1748 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
LINC01140-210ENST00000590653 LRRC53A6NM62 1247 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 TECP42680 631 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 CHRNDQ07001 517 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 LRRC41Q15345 812 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 FNBP4Q8N3X1 1017 aaPredicted RBP12.13□□□□□ -0.47
LINC01140-210ENST00000590653 MMGT1Q8N4V1 131 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 PYM1Q9BRP8 204 aaKnown RBP12.13□□□□□ -0.47
LINC01140-210ENST00000590653 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC01140-210ENST00000590653 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 CD248Q9HCU0 757 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 E7EVH7 732 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 CPP00450 1065 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 SLC1A4P43007 532 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 CABP7Q86V35 215 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 GIMAP8Q8ND71 665 aaPredicted RBP12.13□□□□□ -0.47
LINC01140-210ENST00000590653 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
LINC01140-210ENST00000590653 CALM1P0DP23 149 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 CALM2P0DP24 149 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 CALM3P0DP25 149 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 MYH6P13533 1939 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 CCNE1P24864 410 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 OR2W6PQ8NHA6 318 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 TSGA10Q9BZW7 698 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 TTYH3Q9C0H2 523 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 TCP11L1Q9NUJ3 509 aa12.13□□□□□ -0.47
LINC01140-210ENST00000590653 TNS3Q68CZ2 1445 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 PFKFB3Q16875 520 aaPredicted RBP12.12□□□□□ -0.47
LINC01140-210ENST00000590653 MIIPQ5JXC2 388 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 CEP85LQ5SZL2 805 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 GBP6Q6ZN66 633 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 DNAAF5Q86Y56 855 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 SUGP1Q8IWZ8 645 aaKnown RBP12.12□□□□□ -0.47
LINC01140-210ENST00000590653 C4orf32Q8N8J7 132 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 SH3GL2Q99962 352 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 YY1AP1Q9H869 796 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 TCP1P17987 556 aaKnown RBP12.12□□□□□ -0.47
LINC01140-210ENST00000590653 LSP1P33241 339 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 ACTN3Q08043 901 aaPredicted RBP12.12□□□□□ -0.47
LINC01140-210ENST00000590653 EHHADHQ08426 723 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 ODF2Q5BJF6 829 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 B4GALNT4Q76KP1 1039 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 GOLPH3Q9H4A6 298 aa12.12□□□□□ -0.47
LINC01140-210ENST00000590653 ZNF233A6NK53 670 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 CCNT1O60563 726 aaKnown RBP12.11□□□□□ -0.47
LINC01140-210ENST00000590653 RHOBTB3O94955 611 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 HDLBPQ00341 1268 aaKnown RBP12.11□□□□□ -0.47
LINC01140-210ENST00000590653 NOC3LQ8WTT2 800 aaKnown RBP12.11□□□□□ -0.47
LINC01140-210ENST00000590653 STX8Q9UNK0 236 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 ADAMTS7Q9UKP4 1686 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 BICDL2A1A5D9 508 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 NR1D1P20393 614 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 USP8P40818 1118 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 TRAPPC10P48553 1259 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 EMBQ6PCB8 327 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 DHTKD1Q96HY7 919 aaPredicted RBP12.11□□□□□ -0.47
LINC01140-210ENST00000590653 SLC4A9Q96Q91 983 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 NDST4Q9H3R1 872 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 CALML3P27482 149 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 TXKP42681 527 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 RCAN1P53805 252 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 NAA35Q5VZE5 725 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 ARL6IP4Q66PJ3 421 aaKnown RBP12.11□□□□□ -0.47
LINC01140-210ENST00000590653 FAM114A1Q8IWE2 563 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 TRIM9Q9C026 710 aa12.11□□□□□ -0.47
LINC01140-210ENST00000590653 NID2Q14112 1375 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 MEFVO15553 781 aaPredicted RBP12.1□□□□□ -0.47
LINC01140-210ENST00000590653 RDXP35241 583 aaKnown RBP12.1□□□□□ -0.47
LINC01140-210ENST00000590653 TFAP4Q01664 338 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 CFAP221Q4G0U5 840 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 ALS2CLQ60I27 953 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 DDX42Q86XP3 938 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC01140-210ENST00000590653 DYNLL2Q96FJ2 89 aa12.1□□□□□ -0.47
LINC01140-210ENST00000590653 CABS1Q96KC9 395 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms