RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 PDE4DQ08499 809 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 COL9A3Q14050 684 aaPredicted RBP21.31■■□□□ 1
LDLRAD4-215ENST00000590371 PWP2Q15269 919 aaKnown RBP21.31■■□□□ 1
LDLRAD4-215ENST00000590371 SYNE3Q6ZMZ3 975 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 RASEFQ8IZ41 740 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 DNERQ8NFT8 737 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 PIBF1Q8WXW3 757 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 MTMR8Q96EF0 704 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 KATNBL1Q9H079 304 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 RIOX1Q9H6W3 641 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 VTA1Q9NP79 307 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 PCDHA1Q9Y5I3 950 aa21.31■■□□□ 1
LDLRAD4-215ENST00000590371 ADAMTS4O75173 837 aa21.3■■□□□ 1
LDLRAD4-215ENST00000590371 CFBP00751 764 aa21.3■■□□□ 1
LDLRAD4-215ENST00000590371 C6orf222P0C671 652 aaPredicted RBP21.3■■□□□ 1
LDLRAD4-215ENST00000590371 GNAQP50148 359 aa21.3■■□□□ 1
LDLRAD4-215ENST00000590371 ADCK5Q3MIX3 580 aa21.3■■□□□ 1
LDLRAD4-215ENST00000590371 TSGA10IPQ3SY00 556 aa21.3■■□□□ 1
LDLRAD4-215ENST00000590371 DHX32Q7L7V1 743 aaKnown RBP21.3■■□□□ 1
LDLRAD4-215ENST00000590371 MAF1Q9H063 256 aa21.3■■□□□ 1
LDLRAD4-215ENST00000590371 ZMYND8Q9ULU4 1186 aaPredicted RBP21.3■■□□□ 1
LDLRAD4-215ENST00000590371 PNMA6FA0A0J9YX94 578 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.29■■□□□ 1
LDLRAD4-215ENST00000590371 ADCY6O43306 1168 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 HMGB1P09429 215 aaKnown RBP21.29■■□□□ 1
LDLRAD4-215ENST00000590371 RXRAP19793 462 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 FGD1P98174 961 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 RAB11FIP4Q86YS3 637 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 MORC4Q8TE76 937 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 TBC1D5Q92609 795 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 TCEANC2Q96MN5 208 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 LZTS2Q9BRK4 669 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 PDGFCQ9NRA1 345 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 PHF24Q9UPV7 400 aa21.29■■□□□ 1
LDLRAD4-215ENST00000590371 CYTH3O43739 400 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 PPP1R11O60927 126 aaPredicted RBP21.28■■□□□ 1
LDLRAD4-215ENST00000590371 RTP1P59025 263 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 SLC35G1Q2M3R5 365 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 IQSEC1Q6DN90 963 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 CHRDL2Q6WN34 429 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 SLC39A5Q6ZMH5 540 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 MICU3Q86XE3 530 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 RRP36Q96EU6 259 aaKnown RBP21.28■■□□□ 1
LDLRAD4-215ENST00000590371 TSEN34Q9BSV6 310 aaKnown RBP21.28■■□□□ 1
LDLRAD4-215ENST00000590371 AP5M1Q9H0R1 490 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 SEC63Q9UGP8 760 aaKnown RBP21.28■■□□□ 1
LDLRAD4-215ENST00000590371 ATP11BQ9Y2G3 1177 aa21.28■■□□□ 1
LDLRAD4-215ENST00000590371 EPB41L2O43491 1005 aaKnown RBP21.27■■□□□ 1
LDLRAD4-215ENST00000590371 SYN1P17600 705 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 HSPA4P34932 840 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 GJA9P57773 515 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 KCNA10Q16322 511 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 TAPT1Q6NXT6 567 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 TLK2Q86UE8 772 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 SGMS1Q86VZ5 419 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 PCSK9Q8NBP7 692 aaKnown RBP21.27■■□□□ 1
LDLRAD4-215ENST00000590371 SYTL5Q8TDW5 730 aaPredicted RBP21.27■■□□□ 1
LDLRAD4-215ENST00000590371 JAKMIP1Q96N16 626 aaKnown RBP21.27■■□□□ 1
LDLRAD4-215ENST00000590371 TAAR1Q96RJ0 339 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 SPZ1Q9BXG8 430 aa21.27■■□□□ 1
LDLRAD4-215ENST00000590371 A0A1W2PQ45 241 aaPredicted RBP21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 A0A1W2PQY0 241 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 MYADML2A6NDP7 307 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 MOXD2PA6NHM9 499 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 PLEKHA8P1O95397 391 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 SMPD1P17405 629 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 ACLYP53396 1101 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 EXOSC10Q01780 885 aaKnown RBP21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 GNASQ5JWF2 1037 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 ARHGEF16Q5VV41 709 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 KLHDC9Q8NEP7 349 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 NSUN6Q8TEA1 469 aaKnown RBP21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 VTI1AQ96AJ9 217 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 RMDN3Q96TC7 470 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 UPF3AQ9H1J1 476 aaKnown RBP21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 NAP1L2Q9ULW6 460 aaPredicted RBP21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 COLQQ9Y215 455 aaPredicted RBP21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 SNX14Q9Y5W7 946 aa21.26■□□□□ 0.99
LDLRAD4-215ENST00000590371 DYNC1LI2O43237 492 aaPredicted RBP21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 CST5P28325 142 aaPredicted RBP21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 BLOC1S2Q6QNY1 142 aa21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 CMTR1Q8N1G2 835 aaKnown RBP21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 FANCBQ8NB91 859 aa21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 WDR11Q9BZH6 1224 aa21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 STARD7Q9NQZ5 370 aa21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 COL20A1Q9P218 1284 aa21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 PRKAG2Q9UGJ0 569 aa21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 GNEQ9Y223 722 aaKnown RBP21.25■□□□□ 0.99
LDLRAD4-215ENST00000590371 EIF2AK2P19525 551 aaKnown RBP21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 EDNRBP24530 442 aa21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 SMARCA1P28370 1054 aa21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 IRX5P78411 483 aaPredicted RBP21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 BEX3Q00994 111 aa21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 TRIM60Q495X7 471 aa21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 APOA5Q6Q788 366 aa21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 CCDC82Q8N4S0 544 aa21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 SRBD1Q8N5C6 995 aaKnown RBP21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 SAMD3Q8N6K7 520 aa21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 KCNB2Q92953 911 aa21.24■□□□□ 0.99
LDLRAD4-215ENST00000590371 GLT1D1Q96MS3 346 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms