RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 PIGSQ96S52 555 aa24.88■■□□□ 1.57
LRP3-202ENST00000590275 ABCB11O95342 1321 aa24.87■■□□□ 1.57
LRP3-202ENST00000590275 RXRAP19793 462 aa24.87■■□□□ 1.57
LRP3-202ENST00000590275 MCM5P33992 734 aa24.87■■□□□ 1.57
LRP3-202ENST00000590275 GJA9P57773 515 aa24.87■■□□□ 1.57
LRP3-202ENST00000590275 KCNA10Q16322 511 aa24.87■■□□□ 1.57
LRP3-202ENST00000590275 RNF180Q86T96 592 aa24.87■■□□□ 1.57
LRP3-202ENST00000590275 TAAR1Q96RJ0 339 aa24.87■■□□□ 1.57
LRP3-202ENST00000590275 GDF15Q99988 308 aa24.87■■□□□ 1.57
LRP3-202ENST00000590275 A0A1W2PQ45 241 aaPredicted RBP24.86■■□□□ 1.57
LRP3-202ENST00000590275 A0A1W2PQY0 241 aa24.86■■□□□ 1.57
LRP3-202ENST00000590275 ZBTB5O15062 677 aa24.86■■□□□ 1.57
LRP3-202ENST00000590275 EXOSC10Q01780 885 aaKnown RBP24.86■■□□□ 1.57
LRP3-202ENST00000590275 TNFAIP2Q03169 654 aa24.86■■□□□ 1.57
LRP3-202ENST00000590275 SART3Q15020 963 aaKnown RBP24.86■■□□□ 1.57
LRP3-202ENST00000590275 TRIM60Q495X7 471 aa24.86■■□□□ 1.57
LRP3-202ENST00000590275 NUP133Q8WUM0 1156 aa24.86■■□□□ 1.57
LRP3-202ENST00000590275 PPP4R2Q9NY27 417 aa24.86■■□□□ 1.57
LRP3-202ENST00000590275 PNMA2Q9UL42 364 aa24.86■■□□□ 1.57
LRP3-202ENST00000590275 LAMA3Q16787 3333 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 PLEKHA8P1O95397 391 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 ACLYP53396 1101 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 NKX3-2P78367 333 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 BEX3Q00994 111 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 TSGA10IPQ3SY00 556 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 CASC1Q6TDU7 716 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 CATIPQ7Z7H3 387 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 HOMER1Q86YM7 354 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 ATP11BQ9Y2G3 1177 aa24.85■■□□□ 1.57
LRP3-202ENST00000590275 C6orf222P0C671 652 aaPredicted RBP24.84■■□□□ 1.57
LRP3-202ENST00000590275 CST5P28325 142 aaPredicted RBP24.84■■□□□ 1.57
LRP3-202ENST00000590275 MAGEA10P43363 369 aaPredicted RBP24.84■■□□□ 1.57
LRP3-202ENST00000590275 CMTR1Q8N1G2 835 aaKnown RBP24.84■■□□□ 1.57
LRP3-202ENST00000590275 PIBF1Q8WXW3 757 aa24.84■■□□□ 1.57
LRP3-202ENST00000590275 KCNB2Q92953 911 aa24.84■■□□□ 1.57
LRP3-202ENST00000590275 TMEM87BQ96K49 555 aa24.84■■□□□ 1.57
LRP3-202ENST00000590275 MTA3Q9BTC8 594 aa24.84■■□□□ 1.57
LRP3-202ENST00000590275 AMNQ9BXJ7 453 aa24.84■■□□□ 1.57
LRP3-202ENST00000590275 ADD3Q9UEY8 706 aaKnown RBP24.84■■□□□ 1.57
LRP3-202ENST00000590275 CPA1P15085 419 aa24.83■■□□□ 1.57
LRP3-202ENST00000590275 LIFRP42702 1097 aa24.83■■□□□ 1.57
LRP3-202ENST00000590275 SH3RF1Q7Z6J0 888 aa24.83■■□□□ 1.57
LRP3-202ENST00000590275 SRBD1Q8N5C6 995 aaKnown RBP24.83■■□□□ 1.57
LRP3-202ENST00000590275 NEK1Q96PY6 1258 aa24.83■■□□□ 1.57
LRP3-202ENST00000590275 TSEN34Q9BSV6 310 aaKnown RBP24.83■■□□□ 1.57
LRP3-202ENST00000590275 VTA1Q9NP79 307 aa24.83■■□□□ 1.57
LRP3-202ENST00000590275 MRPL11Q9Y3B7 192 aaKnown RBP24.83■■□□□ 1.57
LRP3-202ENST00000590275 RBM47A0AV96 593 aaKnown RBP24.82■■□□□ 1.56
LRP3-202ENST00000590275 DDAH1O94760 285 aa24.82■■□□□ 1.56
LRP3-202ENST00000590275 GHRHRQ02643 423 aa24.82■■□□□ 1.56
LRP3-202ENST00000590275 DNERQ8NFT8 737 aa24.82■■□□□ 1.56
LRP3-202ENST00000590275 MAP3K14Q99558 947 aa24.82■■□□□ 1.56
LRP3-202ENST00000590275 PCDHA1Q9Y5I3 950 aa24.82■■□□□ 1.56
LRP3-202ENST00000590275 DYNC1LI2O43237 492 aaPredicted RBP24.81■■□□□ 1.56
LRP3-202ENST00000590275 ARIH2O95376 493 aa24.81■■□□□ 1.56
LRP3-202ENST00000590275 ASGR1P07306 291 aa24.81■■□□□ 1.56
LRP3-202ENST00000590275 FXR1P51114 621 aaKnown RBP eCLIP24.81■■□□□ 1.56
LRP3-202ENST00000590275 HSD17B4P51659 736 aa24.81■■□□□ 1.56
LRP3-202ENST00000590275 C1orf53Q5VUE5 145 aa24.81■■□□□ 1.56
LRP3-202ENST00000590275 IQSEC1Q6DN90 963 aa24.81■■□□□ 1.56
LRP3-202ENST00000590275 TLK2Q86UE8 772 aa24.81■■□□□ 1.56
LRP3-202ENST00000590275 BRPF3Q9ULD4 1205 aa24.81■■□□□ 1.56
LRP3-202ENST00000590275 SZT2Q5T011 3432 aa24.81■■□□□ 1.56
LRP3-202ENST00000590275 TRIM43BA6NCK2 446 aa24.8■■□□□ 1.56
LRP3-202ENST00000590275 ITGB8P26012 769 aa24.8■■□□□ 1.56
LRP3-202ENST00000590275 TLE2Q04725 743 aa24.8■■□□□ 1.56
LRP3-202ENST00000590275 GNASQ5JWF2 1037 aa24.8■■□□□ 1.56
LRP3-202ENST00000590275 NFXL1Q6ZNB6 911 aa24.8■■□□□ 1.56
LRP3-202ENST00000590275 SGMS1Q86VZ5 419 aa24.8■■□□□ 1.56
LRP3-202ENST00000590275 COPS5Q92905 334 aa24.8■■□□□ 1.56
LRP3-202ENST00000590275 TRIM43Q96BQ3 446 aaPredicted RBP24.8■■□□□ 1.56
LRP3-202ENST00000590275 SNX14Q9Y5W7 946 aa24.8■■□□□ 1.56
LRP3-202ENST00000590275 LOC102724159A0A0B4J2E5 919 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 PNMA6FA0A0J9YX94 578 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 CFBP00751 764 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 HOXA13P31271 388 aaPredicted RBP24.79■■□□□ 1.56
LRP3-202ENST00000590275 HSPA4P34932 840 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 MDM2Q00987 491 aaPredicted RBP24.79■■□□□ 1.56
LRP3-202ENST00000590275 PDE4DQ08499 809 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 PWP2Q15269 919 aaKnown RBP24.79■■□□□ 1.56
LRP3-202ENST00000590275 RNF20Q5VTR2 975 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 NOL8Q76FK4 1167 aaKnown RBP24.79■■□□□ 1.56
LRP3-202ENST00000590275 SPZ1Q9BXG8 430 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 WDR11Q9BZH6 1224 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 PDLIM7Q9NR12 457 aa24.79■■□□□ 1.56
LRP3-202ENST00000590275 TRIOBPQ9H2D6 2365 aa24.78■■□□□ 1.56
LRP3-202ENST00000590275 MOXD2PA6NHM9 499 aa24.78■■□□□ 1.56
LRP3-202ENST00000590275 CCDC69A6NI79 296 aa24.78■■□□□ 1.56
LRP3-202ENST00000590275 DUSP28Q4G0W2 176 aa24.78■■□□□ 1.56
LRP3-202ENST00000590275 DHX32Q7L7V1 743 aaKnown RBP24.78■■□□□ 1.56
LRP3-202ENST00000590275 MCF2L2Q86YR7 1114 aa24.78■■□□□ 1.56
LRP3-202ENST00000590275 RMDN3Q96TC7 470 aa24.78■■□□□ 1.56
LRP3-202ENST00000590275 GRIN2DO15399 1336 aa24.78■■□□□ 1.56
LRP3-202ENST00000590275 BAZ2BQ9UIF8 2168 aaKnown RBP24.77■■□□□ 1.56
LRP3-202ENST00000590275 hCG_1642624A0A1W2PR95 340 aa24.77■■□□□ 1.56
LRP3-202ENST00000590275 EIF2AK2P19525 551 aaKnown RBP24.77■■□□□ 1.56
LRP3-202ENST00000590275 CDK7P50613 346 aa24.77■■□□□ 1.56
LRP3-202ENST00000590275 FSCN1Q16658 493 aaKnown RBP24.77■■□□□ 1.56
LRP3-202ENST00000590275 ERICH6BQ5W0A0 696 aa24.77■■□□□ 1.56
LRP3-202ENST00000590275 CXCL17Q6UXB2 119 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms