RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 RASGRP4Q8TDF6 673 aa17.51■□□□□ 0.39
MBD1-222ENST00000590208 ESR2Q92731 530 aa17.51■□□□□ 0.39
MBD1-222ENST00000590208 ZSCAN10Q96SZ4 725 aaPredicted RBP17.51■□□□□ 0.39
MBD1-222ENST00000590208 VCPKMTQ9H867 229 aa17.51■□□□□ 0.39
MBD1-222ENST00000590208 PPANQ9NQ55 473 aaKnown RBP17.51■□□□□ 0.39
MBD1-222ENST00000590208 MYH2Q9UKX2 1941 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 XIRP1Q702N8 1843 aaKnown RBP17.5■□□□□ 0.39
MBD1-222ENST00000590208 RTL9Q8NET4 1388 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 E7EVH7 732 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 CHUKO15111 745 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 HEXIM1O94992 359 aaKnown RBP17.5■□□□□ 0.39
MBD1-222ENST00000590208 PRLRP16471 622 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
MBD1-222ENST00000590208 TMC4Q7Z404 712 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 ADGRA1Q86SQ6 560 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 RETREG2Q8NC44 543 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 GIMAP7Q8NHV1 300 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 MTMR8Q96EF0 704 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 A1CFQ9NQ94 594 aaKnown RBP17.5■□□□□ 0.39
MBD1-222ENST00000590208 A6NNZ2 444 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 AKR1B10O60218 316 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 SSBP05455 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
MBD1-222ENST00000590208 RDXP35241 583 aaKnown RBP17.5■□□□□ 0.39
MBD1-222ENST00000590208 TUBB8Q3ZCM7 444 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 MICALCLQ6ZW33 695 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 C4orf32Q8N8J7 132 aa17.5■□□□□ 0.39
MBD1-222ENST00000590208 GIMAP8Q8ND71 665 aaPredicted RBP17.5■□□□□ 0.39
MBD1-222ENST00000590208 IQSEC3Q9UPP2 1182 aaPredicted RBP17.5■□□□□ 0.39
MBD1-222ENST00000590208 MDH1P40925 334 aaKnown RBP17.49■□□□□ 0.39
MBD1-222ENST00000590208 LPIN2Q92539 896 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 HPS3Q969F9 1004 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 SLC40A1Q9NP59 571 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 PLAGL2Q9UPG8 496 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 BACH1O14867 736 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 RASSF9O75901 435 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 RASSF7Q02833 373 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
MBD1-222ENST00000590208 SPATS2Q86XZ4 545 aaKnown RBP17.49■□□□□ 0.39
MBD1-222ENST00000590208 IFT20Q8IY31 132 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 RUBCNQ92622 972 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 ALS2CR12Q96Q35 445 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 PYM1Q9BRP8 204 aaKnown RBP17.49■□□□□ 0.39
MBD1-222ENST00000590208 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
MBD1-222ENST00000590208 IRS4O14654 1257 aaPredicted RBP17.48■□□□□ 0.39
MBD1-222ENST00000590208 NMT2O60551 498 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 FCER1AP12319 257 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 BCAMP50895 628 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 SMTNP53814 917 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 STK4Q13043 487 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 TMTC3Q6ZXV5 915 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 YTHDF3Q7Z739 585 aaKnown RBP17.48■□□□□ 0.39
MBD1-222ENST00000590208 CNTNAP5Q8WYK1 1306 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 RHOBTB3O94955 611 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 PDHBP11177 359 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 MAGEA1P43355 309 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 EVX2Q03828 476 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 GFPT1Q06210 699 aaPredicted RBP17.48■□□□□ 0.39
MBD1-222ENST00000590208 KLHDC7AQ5VTJ3 777 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 TMEM60Q9H2L4 133 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 GDF3Q9NR23 364 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 SLAIN2Q9P270 581 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 MCM8Q9UJA3 840 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 FAM205AQ6ZU69 1335 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
MBD1-222ENST00000590208 GNAT2P19087 354 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 FGFR2P21802 821 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 LONP1P36776 959 aaKnown RBP17.48■□□□□ 0.39
MBD1-222ENST00000590208 CDK17Q00537 523 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 NEDD9Q14511 834 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 KCNB1Q14721 858 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 CEP85LQ5SZL2 805 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 KIF6Q6ZMV9 814 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 MAATS1Q7Z4T9 603 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 CEP57Q86XR8 500 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 CASKIN2Q8WXE0 1202 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 P2RX5Q93086 422 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 ATP6V1G3Q96LB4 118 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 MTA3Q9BTC8 594 aa17.48■□□□□ 0.39
MBD1-222ENST00000590208 TNFRSF8P28908 595 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 PPP2R5BQ15173 497 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 CCDC178Q5BJE1 867 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 TOM1L2Q6ZVM7 507 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 N4BP2L2Q92802 583 aaPredicted RBP17.47■□□□□ 0.39
MBD1-222ENST00000590208 PAGR1Q9BTK6 254 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 LRP2BPQ9P2M1 347 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 FAM107AO95990 144 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 ELF1P32519 619 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
MBD1-222ENST00000590208 PREPLQ4J6C6 727 aaPredicted RBP17.47■□□□□ 0.39
MBD1-222ENST00000590208 RRAGAQ7L523 313 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 OR2W6PQ8NHA6 318 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 ERGIC2Q96RQ1 377 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 KRT12Q99456 494 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 MMRN2Q9H8L6 949 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
MBD1-222ENST00000590208 SCG2P13521 617 aa17.46■□□□□ 0.39
MBD1-222ENST00000590208 C6orf89Q6UWU4 347 aa17.46■□□□□ 0.39
MBD1-222ENST00000590208 CCDC114Q96M63 670 aa17.46■□□□□ 0.39
MBD1-222ENST00000590208 PACSIN2Q9UNF0 486 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms