RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 CFBP00751 764 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 KIF5BP33176 963 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 RTP1P59025 263 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 PDE4DQ08499 809 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 HABP4Q5JVS0 413 aaKnown RBP14.03□□□□□ -0.16
TPM4-212ENST00000590180 GNASQ5JWF2 1037 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 SYNE3Q6ZMZ3 975 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 TAAR1Q96RJ0 339 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 TSEN34Q9BSV6 310 aaKnown RBP14.03□□□□□ -0.16
TPM4-212ENST00000590180 AP5M1Q9H0R1 490 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 RIOX1Q9H6W3 641 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 VTA1Q9NP79 307 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 SYNRGQ9UMZ2 1314 aa14.03□□□□□ -0.16
TPM4-212ENST00000590180 TRIOBPQ9H2D6 2365 aa14.02□□□□□ -0.16
TPM4-212ENST00000590180 MCM3APO60318 1980 aa14.02□□□□□ -0.16
TPM4-212ENST00000590180 LOC102724159A0A0B4J2E5 919 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 ADCY6O43306 1168 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 DDAH1O94760 285 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 SMPD1P17405 629 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 LIFRP42702 1097 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 GNAQP50148 359 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 ACLYP53396 1101 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 GJA9P57773 515 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 IRX5P78411 483 aaPredicted RBP14.02□□□□□ -0.17
TPM4-212ENST00000590180 TRAF1Q13077 416 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 COL9A3Q14050 684 aaPredicted RBP14.02□□□□□ -0.17
TPM4-212ENST00000590180 KRT32Q14532 448 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 PWP2Q15269 919 aaKnown RBP14.02□□□□□ -0.17
TPM4-212ENST00000590180 TAPT1Q6NXT6 567 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 DHX32Q7L7V1 743 aaKnown RBP14.02□□□□□ -0.17
TPM4-212ENST00000590180 RAB11FIP4Q86YS3 637 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 PCSK9Q8NBP7 692 aaKnown RBP14.02□□□□□ -0.17
TPM4-212ENST00000590180 KLHDC9Q8NEP7 349 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 DNERQ8NFT8 737 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 SYTL5Q8TDW5 730 aaPredicted RBP14.02□□□□□ -0.17
TPM4-212ENST00000590180 MORC4Q8TE76 937 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 PRKAG2Q9UGJ0 569 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.17
TPM4-212ENST00000590180 PNMA6FA0A0J9YX94 578 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 MYADML2A6NDP7 307 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 CYTH3O43739 400 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 PPP1R11O60927 126 aaPredicted RBP14.01□□□□□ -0.17
TPM4-212ENST00000590180 CALM1P0DP23 149 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 CALM2P0DP24 149 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 CALM3P0DP25 149 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 RXRAP19793 462 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 BEX3Q00994 111 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 SLC35G1Q2M3R5 365 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 TSGA10IPQ3SY00 556 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 TRIM60Q495X7 471 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 NSUN6Q8TEA1 469 aaKnown RBP14.01□□□□□ -0.17
TPM4-212ENST00000590180 TCEANC2Q96MN5 208 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 RMDN3Q96TC7 470 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 MAP3K14Q99558 947 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 WDR11Q9BZH6 1224 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 MAF1Q9H063 256 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 STARD7Q9NQZ5 370 aa14.01□□□□□ -0.17
TPM4-212ENST00000590180 RBM27Q9P2N5 1060 aaKnown RBP14.01□□□□□ -0.17
TPM4-212ENST00000590180 A0A1W2PQ45 241 aaPredicted RBP14□□□□□ -0.17
TPM4-212ENST00000590180 A0A1W2PQY0 241 aa14□□□□□ -0.17
TPM4-212ENST00000590180 MOXD2PA6NHM9 499 aa14□□□□□ -0.17
TPM4-212ENST00000590180 REC8O95072 547 aa14□□□□□ -0.17
TPM4-212ENST00000590180 ASGR1P07306 291 aa14□□□□□ -0.17
TPM4-212ENST00000590180 FGD1P98174 961 aa14□□□□□ -0.17
TPM4-212ENST00000590180 EXOSC10Q01780 885 aaKnown RBP14□□□□□ -0.17
TPM4-212ENST00000590180 TLE2Q04725 743 aa14□□□□□ -0.17
TPM4-212ENST00000590180 ADCK5Q3MIX3 580 aa14□□□□□ -0.17
TPM4-212ENST00000590180 TMEM63BQ5T3F8 832 aa14□□□□□ -0.17
TPM4-212ENST00000590180 ARHGEF16Q5VV41 709 aa14□□□□□ -0.17
TPM4-212ENST00000590180 TLK2Q86UE8 772 aa14□□□□□ -0.17
TPM4-212ENST00000590180 RRP36Q96EU6 259 aaKnown RBP14□□□□□ -0.17
TPM4-212ENST00000590180 GLT1D1Q96MS3 346 aa14□□□□□ -0.17
TPM4-212ENST00000590180 UPF3AQ9H1J1 476 aaKnown RBP14□□□□□ -0.17
TPM4-212ENST00000590180 PRDM5Q9NQX1 630 aaPredicted RBP14□□□□□ -0.17
TPM4-212ENST00000590180 GNEQ9Y223 722 aaKnown RBP14□□□□□ -0.17
TPM4-212ENST00000590180 ZEB2O60315 1214 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 HMGB1P09429 215 aaKnown RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 EIF2AK2P19525 551 aaKnown RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 PTGS1P23219 599 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 CST5P28325 142 aaPredicted RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 SMARCA1P28370 1054 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 MDM2Q00987 491 aaPredicted RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 FSCN1Q16658 493 aaKnown RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 DUSP28Q4G0W2 176 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 CCSAPQ6IQ19 270 aaPredicted RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 CMTR1Q8N1G2 835 aaKnown RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 CCDC82Q8N4S0 544 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 FANCBQ8NB91 859 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 LBHD1Q9BQE6 289 aaPredicted RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 NAP1L2Q9ULW6 460 aaPredicted RBP13.99□□□□□ -0.17
TPM4-212ENST00000590180 Q9Y3F1 56 aa13.99□□□□□ -0.17
TPM4-212ENST00000590180 RBM47A0AV96 593 aaKnown RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 GCOM1H8Y6P7 765 aaPredicted RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 PQBP1O60828 265 aaKnown RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 PLEKHA8P1O95397 391 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms