RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 DNERQ8NFT8 737 aa16.81■□□□□ 0.28
MBD1-220ENST00000589758 RUFY2Q8WXA3 655 aa16.81■□□□□ 0.28
MBD1-220ENST00000589758 PURBQ96QR8 312 aaKnown RBP16.81■□□□□ 0.28
MBD1-220ENST00000589758 PDGFCQ9NRA1 345 aa16.81■□□□□ 0.28
MBD1-220ENST00000589758 TBX21Q9UL17 535 aa16.81■□□□□ 0.28
MBD1-220ENST00000589758 RAD50Q92878 1312 aa16.8■□□□□ 0.28
MBD1-220ENST00000589758 CALML3P27482 149 aa16.8■□□□□ 0.28
MBD1-220ENST00000589758 PDE4AP27815 886 aa16.8■□□□□ 0.28
MBD1-220ENST00000589758 SMAD3P84022 425 aaKnown RBP16.8■□□□□ 0.28
MBD1-220ENST00000589758 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
MBD1-220ENST00000589758 ZNF697Q5TEC3 545 aa16.8■□□□□ 0.28
MBD1-220ENST00000589758 FAM126BQ8IXS8 530 aa16.8■□□□□ 0.28
MBD1-220ENST00000589758 ENAHQ8N8S7 591 aaPredicted RBP16.8■□□□□ 0.28
MBD1-220ENST00000589758 RGS22Q8NE09 1264 aa16.8■□□□□ 0.28
MBD1-220ENST00000589758 UBAC1Q9BSL1 405 aa16.8■□□□□ 0.28
MBD1-220ENST00000589758 DNAH12Q6ZR08 3092 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 TNKSO95271 1327 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
MBD1-220ENST00000589758 GOLGA8HP0CJ92 632 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 RPS6P62753 249 aaKnown RBP16.79■□□□□ 0.28
MBD1-220ENST00000589758 PDE4DQ08499 809 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 DUSP28Q4G0W2 176 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 MFSD5Q6N075 450 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 CXCL17Q6UXB2 119 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 SLC30A10Q6XR72 485 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 SLC17A8Q8NDX2 589 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 RNPC3Q96LT9 517 aaKnown RBP16.79■□□□□ 0.28
MBD1-220ENST00000589758 UBA5Q9GZZ9 404 aa16.79■□□□□ 0.28
MBD1-220ENST00000589758 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
MBD1-220ENST00000589758 ABCB11O95342 1321 aa16.78■□□□□ 0.28
MBD1-220ENST00000589758 CD4P01730 458 aa16.78■□□□□ 0.28
MBD1-220ENST00000589758 PARP1P09874 1014 aaKnown RBP16.78■□□□□ 0.28
MBD1-220ENST00000589758 GSPT1P15170 499 aaKnown RBP16.78■□□□□ 0.28
MBD1-220ENST00000589758 CDC37Q16543 378 aaPredicted RBP16.78■□□□□ 0.28
MBD1-220ENST00000589758 USH1GQ495M9 461 aa16.78■□□□□ 0.28
MBD1-220ENST00000589758 TMEM199Q8N511 208 aa16.78■□□□□ 0.28
MBD1-220ENST00000589758 SLC43A3Q8NBI5 491 aa16.78■□□□□ 0.28
MBD1-220ENST00000589758 WDR11Q9BZH6 1224 aa16.78■□□□□ 0.28
MBD1-220ENST00000589758 POLR3EQ9NVU0 708 aa16.78■□□□□ 0.28
MBD1-220ENST00000589758 NKRFO15226 690 aaKnown RBP eCLIP16.77■□□□□ 0.28
MBD1-220ENST00000589758 EPHB4P54760 987 aa16.77■□□□□ 0.28
MBD1-220ENST00000589758 TRDNQ13061 729 aa16.77■□□□□ 0.28
MBD1-220ENST00000589758 PPIGQ13427 754 aaKnown RBP eCLIP16.77■□□□□ 0.287e-8■■■■□ 26.2
MBD1-220ENST00000589758 ITGA7Q13683 1181 aa16.77■□□□□ 0.28
MBD1-220ENST00000589758 IFIT1BQ5T764 474 aaKnown RBP16.77■□□□□ 0.28
MBD1-220ENST00000589758 MCF2L2Q86YR7 1114 aa16.77■□□□□ 0.28
MBD1-220ENST00000589758 ADGRF4Q8IZF3 695 aa16.77■□□□□ 0.28
MBD1-220ENST00000589758 CCDC136Q96JN2 1154 aa16.77■□□□□ 0.28
MBD1-220ENST00000589758 DHX16O60231 1041 aaKnown RBP16.76■□□□□ 0.27
MBD1-220ENST00000589758 EDNRBP24530 442 aa16.76■□□□□ 0.27
MBD1-220ENST00000589758 CPT1AP50416 773 aa16.76■□□□□ 0.27
MBD1-220ENST00000589758 BRDTQ58F21 947 aaPredicted RBP16.76■□□□□ 0.27
MBD1-220ENST00000589758 TMEM63BQ5T3F8 832 aa16.76■□□□□ 0.27
MBD1-220ENST00000589758 SCFD2Q8WU76 684 aa16.76■□□□□ 0.27
MBD1-220ENST00000589758 IL25Q9H293 177 aa16.76■□□□□ 0.27
MBD1-220ENST00000589758 CPVLQ9H3G5 476 aa16.76■□□□□ 0.27
MBD1-220ENST00000589758 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
MBD1-220ENST00000589758 TMEM265A0A087WTH1 108 aa16.75■□□□□ 0.27
MBD1-220ENST00000589758 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.75■□□□□ 0.27
MBD1-220ENST00000589758 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.75■□□□□ 0.27
MBD1-220ENST00000589758 PTGS1P23219 599 aa16.75■□□□□ 0.27
MBD1-220ENST00000589758 CHMLP26374 656 aa16.75■□□□□ 0.27
MBD1-220ENST00000589758 PPP2R5BQ15173 497 aa16.75■□□□□ 0.27
MBD1-220ENST00000589758 FBXO11Q86XK2 927 aa16.75■□□□□ 0.27
MBD1-220ENST00000589758 OR6J1Q8NGC5 347 aa16.75■□□□□ 0.27
MBD1-220ENST00000589758 GUCD1Q96NT3 240 aa16.75■□□□□ 0.27
MBD1-220ENST00000589758 GPHNQ9NQX3 736 aaPredicted RBP16.75■□□□□ 0.27
MBD1-220ENST00000589758 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
MBD1-220ENST00000589758 GRIN2DO15399 1336 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 KPNA6O60684 536 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 SEC23AQ15436 765 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 QRICH1Q2TAL8 776 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 PSRC1Q6PGN9 363 aaPredicted RBP16.74■□□□□ 0.27
MBD1-220ENST00000589758 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
MBD1-220ENST00000589758 FAM161BQ96MY7 647 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.74■□□□□ 0.271e-10■■□□□ 12.6
MBD1-220ENST00000589758 PPP1R12CQ9BZL4 782 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 SEMA6BQ9H3T3 888 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 JMJD4Q9H9V9 463 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 VAT1LQ9HCJ6 419 aa16.74■□□□□ 0.27
MBD1-220ENST00000589758 ERICH2A1L162 156 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 CSF2RAP15509 400 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 PSMC6P62333 389 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 PURAQ00577 322 aaKnown RBP16.73■□□□□ 0.27
MBD1-220ENST00000589758 TTLL4Q14679 1199 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 TMEM240Q5SV17 173 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 CYB5R4Q7L1T6 521 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 NSUN6Q8TEA1 469 aaKnown RBP16.73■□□□□ 0.27
MBD1-220ENST00000589758 IWS1Q96ST2 819 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 AMNQ9BXJ7 453 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 HIPK3Q9H422 1215 aa16.73■□□□□ 0.27
MBD1-220ENST00000589758 MYH6P13533 1939 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 A6NJR5 290 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 KLRF2D3W0D1 207 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 B4GALT4O60513 344 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 MYL3P08590 195 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 CYP21A2P08686 494 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 SUPT20HL2P0C7V6 817 aa16.72■□□□□ 0.27
MBD1-220ENST00000589758 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
MBD1-220ENST00000589758 CYP2C18P33260 490 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms