RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	CNGA1	P29973	690 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	PPP2R5B	Q15173	497 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	ANKRD1	Q15327	319 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	NTRK3	Q16288	839 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	MAP3K21	Q5TCX8	1036 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	MCF2L2	Q86YR7	1114 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	TAAR1	Q96RJ0	339 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	SLK	Q9H2G2	1235 aa	Predicted RBP	13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	HMX1	Q9NP08	348 aa	Predicted RBP	13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	COL20A1	Q9P218	1284 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	ASTN1	O14525	1302 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	RPTOR	Q8N122	1335 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	ZNF236	Q9UL36	1845 aa		13.78	□□□□□ -0.2
RFX2-215	ENST00000589742	LARGE1	O95461	756 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	SNAI1	O95863	264 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	HOXA13	P31271	388 aa	Predicted RBP	13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	SCRN1	Q12765	414 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	NID2	Q14112	1375 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	ME3	Q16798	604 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	ARMCX2	Q7L311	632 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	HEATR3	Q7Z4Q2	680 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	NECAB1	Q8N987	351 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	RGS22	Q8NE09	1264 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	TBC1D32	Q96NH3	1257 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	DEFB118	Q96PH6	123 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	SLC26A6	Q9BXS9	759 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	PLXNA1	Q9UIW2	1896 aa		13.77	□□□□□ -0.21
RFX2-215	ENST00000589742	CPLX1	O14810	134 aa		13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	PFKFB2	O60825	505 aa		13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	EN2	P19622	333 aa	Predicted RBP	13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	TRAF1	Q13077	416 aa		13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	ANO1	Q5XXA6	986 aa		13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	WWC2	Q6AWC2	1192 aa		13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	MAMDC4	Q6UXC1	1216 aa		13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	EEPD1	Q7L9B9	569 aa		13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	MCM3AP	O60318	1980 aa		13.76	□□□□□ -0.21
RFX2-215	ENST00000589742	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	PRPF3	O43395	683 aa	Known RBP	13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	GJB1	P08034	283 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	POLR2M	P0CAP2	368 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	CYBA	P13498	195 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	IFNAR1	P17181	557 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	ALDH5A1	P51649	535 aa	Predicted RBP	13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	HSD17B4	P51659	736 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	AKAP17A	Q02040	695 aa	Known RBP	13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	PKN1	Q16512	942 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	TYW1B	Q6NUM6	668 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	USP17L6P	Q6QN14	398 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	FCHSD1	Q86WN1	690 aa		13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	MSL3	Q8N5Y2	521 aa	Known RBP	13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	PAK6	Q9NQU5	681 aa	Predicted RBP	13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	ADD3	Q9UEY8	706 aa	Known RBP	13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.75	□□□□□ -0.21
RFX2-215	ENST00000589742	SYNGAP1	Q96PV0	1343 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	ASB14	A6NK59	587 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	STXBP3	O00186	592 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	SGPL1	O95470	568 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	NAPA	P54920	295 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	SSRP1	Q08945	709 aa	Known RBP	13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	ACVR2B	Q13705	512 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	RABEP1	Q15276	862 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	PFKFB3	Q16875	520 aa	Predicted RBP	13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	U2AF1L4	Q8WU68	220 aa	Known RBP	13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	RMDN3	Q96TC7	470 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	PSTPIP2	Q9H939	334 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	LIMCH1	Q9UPQ0	1083 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	CNPY2	Q9Y2B0	182 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	LCT	P09848	1927 aa		13.74	□□□□□ -0.21
RFX2-215	ENST00000589742	CTDNEP1	O95476	244 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	TFRC	P02786	760 aa	Known RBP	13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	SCG2	P13521	617 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	EIF2AK2	P19525	551 aa	Known RBP	13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	GJA8	P48165	433 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	GHRHR	Q02643	423 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	ST3GAL1	Q11201	340 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	UBE2S	Q16763	222 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	ARHGEF16	Q5VV41	709 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	CPLX2	Q6PUV4	134 aa	Known RBP	13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	FBXO16	Q8IX29	292 aa	Predicted RBP	13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	DNER	Q8NFT8	737 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	SMARCC2	Q8TAQ2	1214 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	ZFP91	Q96JP5	570 aa	Predicted RBP	13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	RNF26	Q9BY78	433 aa	Predicted RBP	13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	KATNBL1	Q9H079	304 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	ABHD16B	Q9H3Z7	469 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	PDGFC	Q9NRA1	345 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	BARHL2	Q9NY43	387 aa		13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	DDX20	Q9UHI6	824 aa	Known RBP	13.73	□□□□□ -0.21
RFX2-215	ENST00000589742	SMCO2	A6NFE2	343 aa		13.72	□□□□□ -0.21
RFX2-215	ENST00000589742	MEIS2	O14770	477 aa		13.72	□□□□□ -0.21
RFX2-215	ENST00000589742	SEPT4	O43236	478 aa		13.72	□□□□□ -0.21
RFX2-215	ENST00000589742	PDE4D	Q08499	809 aa		13.72	□□□□□ -0.21
RFX2-215	ENST00000589742	LHX8	Q68G74	356 aa		13.72	□□□□□ -0.21
RFX2-215	ENST00000589742	TRIM22	Q8IYM9	498 aa		13.72	□□□□□ -0.21

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