RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 KRT23Q9C075 422 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 CNNM2Q9H8M5 875 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 ZSWIM5Q9P217 1185 aa14.32□□□□□ -0.12
VAT1-206ENST00000589709 SUPT16HQ9Y5B9 1047 aaKnown RBP14.32□□□□□ -0.12
VAT1-206ENST00000589709 DDX49Q9Y6V7 483 aaKnown RBP14.32□□□□□ -0.12
VAT1-206ENST00000589709 LAMA2P24043 3122 aaKnown RBP14.31□□□□□ -0.12
VAT1-206ENST00000589709 COL6A3P12111 3177 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 PTPDC1A2A3K4 754 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 B4DLN1 442 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 B4E1Z4 1266 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 EDNRBP24530 442 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 MRPL12P52815 198 aaKnown RBP14.31□□□□□ -0.12
VAT1-206ENST00000589709 RPS6P62753 249 aaKnown RBP14.31□□□□□ -0.12
VAT1-206ENST00000589709 ASPRV1Q53RT3 343 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 ENAHQ8N8S7 591 aaPredicted RBP14.31□□□□□ -0.12
VAT1-206ENST00000589709 DNERQ8NFT8 737 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 RNPC3Q96LT9 517 aaKnown RBP14.31□□□□□ -0.12
VAT1-206ENST00000589709 GUCD1Q96NT3 240 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 MPHOSPH6Q99547 160 aaKnown RBP14.31□□□□□ -0.12
VAT1-206ENST00000589709 KAT14Q9H8E8 782 aa14.31□□□□□ -0.12
VAT1-206ENST00000589709 GOLGA8HP0CJ92 632 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 CALML3P27482 149 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 PDE4AP27815 886 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 PPIGQ13427 754 aaKnown RBP eCLIP14.3□□□□□ -0.12
VAT1-206ENST00000589709 ITGA7Q13683 1181 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 TMEM63BQ5T3F8 832 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 TTC22Q5TAA0 569 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 SLC30A10Q6XR72 485 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 WDR11Q9BZH6 1224 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 UBA5Q9GZZ9 404 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 SEMA6BQ9H3T3 888 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 GRIN2DO15399 1336 aa14.3□□□□□ -0.12
VAT1-206ENST00000589709 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 GSPT1P15170 499 aaKnown RBP14.29□□□□□ -0.12
VAT1-206ENST00000589709 PDE4DQ08499 809 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 TMEM199Q8N511 208 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 UBAC1Q9BSL1 405 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 TNKSO95271 1327 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 RAD50Q92878 1312 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 LRRC37A2A6NM11 1700 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 LCTP09848 1927 aa14.29□□□□□ -0.12
VAT1-206ENST00000589709 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.28□□□□□ -0.12
VAT1-206ENST00000589709 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.28□□□□□ -0.12
VAT1-206ENST00000589709 NKRFO15226 690 aaKnown RBP eCLIP14.28□□□□□ -0.12
VAT1-206ENST00000589709 ABCB11O95342 1321 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 PARP1P09874 1014 aaKnown RBP14.28□□□□□ -0.12
VAT1-206ENST00000589709 PTGS1P23219 599 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 CPT1AP50416 773 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 LAMA4Q16363 1823 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 CDC37Q16543 378 aaPredicted RBP14.28□□□□□ -0.12
VAT1-206ENST00000589709 RASIP1Q5U651 963 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 ADGRF4Q8IZF3 695 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 SCFD2Q8WU76 684 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 RUFY2Q8WXA3 655 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.28□□□□□ -0.12
VAT1-206ENST00000589709 IL25Q9H293 177 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 CPVLQ9H3G5 476 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 POLR3EQ9NVU0 708 aa14.28□□□□□ -0.12
VAT1-206ENST00000589709 KPNA6O60684 536 aa14.27□□□□□ -0.13
VAT1-206ENST00000589709 CSF2RAP15509 400 aa14.27□□□□□ -0.13
VAT1-206ENST00000589709 SEC23AQ15436 765 aa14.27□□□□□ -0.13
VAT1-206ENST00000589709 USH1GQ495M9 461 aa14.27□□□□□ -0.13
VAT1-206ENST00000589709 BRDTQ58F21 947 aaPredicted RBP14.27□□□□□ -0.13
VAT1-206ENST00000589709 TMEM240Q5SV17 173 aa14.27□□□□□ -0.13
VAT1-206ENST00000589709 MCF2L2Q86YR7 1114 aa14.27□□□□□ -0.13
VAT1-206ENST00000589709 FAM161BQ96MY7 647 aa14.27□□□□□ -0.13
VAT1-206ENST00000589709 CDX2Q99626 313 aaPredicted RBP14.27□□□□□ -0.13
VAT1-206ENST00000589709 TTYH1Q9H313 450 aaPredicted RBP14.27□□□□□ -0.13
VAT1-206ENST00000589709 JMJD4Q9H9V9 463 aa14.27□□□□□ -0.13
VAT1-206ENST00000589709 A6NJR5 290 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 CHMLP26374 656 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 CYP2C18P33260 490 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 PURAQ00577 322 aaKnown RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 PPP2R5BQ15173 497 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 QRICH1Q2TAL8 776 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 IFIT1BQ5T764 474 aaKnown RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 PSRC1Q6PGN9 363 aaPredicted RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 OR6J1Q8NGC5 347 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 SYTL5Q8TDW5 730 aaPredicted RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 NSUN6Q8TEA1 469 aaKnown RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 IWS1Q96ST2 819 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 MTG1Q9BT17 334 aaPredicted RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 NOC4LQ9BVI4 516 aaKnown RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 PPP1R12CQ9BZL4 782 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 TRPV6Q9H1D0 765 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 HIPK3Q9H422 1215 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 IL23AQ9NPF7 189 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 MRPL11Q9Y3B7 192 aaKnown RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
VAT1-206ENST00000589709 A0A0C4DFX4 3053 aa14.26□□□□□ -0.13
VAT1-206ENST00000589709 B4GALT4O60513 344 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 SUPT20HL2P0C7V6 817 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 PSMC6P62333 389 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 GHRHRQ02643 423 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 TRDNQ13061 729 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 TTLL4Q14679 1199 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 ZNF365Q70YC5 407 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 FBXO11Q86XK2 927 aa14.25□□□□□ -0.13
VAT1-206ENST00000589709 TBC1D5Q92609 795 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms