RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-210ENST00000589675 PNMA1Q8ND90 353 aa13.07□□□□□ -0.32
DDX39A-210ENST00000589675 SLC17A8Q8NDX2 589 aa13.07□□□□□ -0.32
DDX39A-210ENST00000589675 DNERQ8NFT8 737 aa13.07□□□□□ -0.32
DDX39A-210ENST00000589675 ZSCAN10Q96SZ4 725 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-210ENST00000589675 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
DDX39A-210ENST00000589675 KRT23Q9C075 422 aa13.07□□□□□ -0.32
DDX39A-210ENST00000589675 PDGFCQ9NRA1 345 aa13.07□□□□□ -0.32
DDX39A-210ENST00000589675 ZSWIM5Q9P217 1185 aa13.07□□□□□ -0.32
DDX39A-210ENST00000589675 SUPT16HQ9Y5B9 1047 aaKnown RBP13.07□□□□□ -0.32
DDX39A-210ENST00000589675 PTPDC1A2A3K4 754 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 B4DLN1 442 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 B4E1Z4 1266 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 DYNC1LI2O43237 492 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-210ENST00000589675 EDNRBP24530 442 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
DDX39A-210ENST00000589675 EPHB4P54760 987 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 RPS6P62753 249 aaKnown RBP13.06□□□□□ -0.32
DDX39A-210ENST00000589675 ASPRV1Q53RT3 343 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 ZNF697Q5TEC3 545 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 ENAHQ8N8S7 591 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-210ENST00000589675 PURBQ96QR8 312 aaKnown RBP13.06□□□□□ -0.32
DDX39A-210ENST00000589675 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
DDX39A-210ENST00000589675 KAT14Q9H8E8 782 aa13.06□□□□□ -0.32
DDX39A-210ENST00000589675 TMEM265A0A087WTH1 108 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 PDE4AP27815 886 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 PPIGQ13427 754 aaKnown RBP eCLIP13.05□□□□□ -0.323e-7■■□□□ 13
DDX39A-210ENST00000589675 ITGA7Q13683 1181 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 CXCL17Q6UXB2 119 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 SLC30A10Q6XR72 485 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 RNPC3Q96LT9 517 aaKnown RBP13.05□□□□□ -0.32
DDX39A-210ENST00000589675 GUCD1Q96NT3 240 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 WDR11Q9BZH6 1224 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 SEMA6BQ9H3T3 888 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
DDX39A-210ENST00000589675 GRIN2DO15399 1336 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 RAD50Q92878 1312 aa13.05□□□□□ -0.32
DDX39A-210ENST00000589675 KIAA1217Q5T5P2 1943 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 SCN10AQ9Y5Y9 1956 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 NKRFO15226 690 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX39A-210ENST00000589675 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 GSPT1P15170 499 aaKnown RBP13.04□□□□□ -0.32
DDX39A-210ENST00000589675 CALML3P27482 149 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 POLR3EQ9NVU0 708 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 TNKSO95271 1327 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 ABCB11O95342 1321 aa13.04□□□□□ -0.32
DDX39A-210ENST00000589675 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-210ENST00000589675 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-210ENST00000589675 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
DDX39A-210ENST00000589675 CPT1AP50416 773 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 PDE4DQ08499 809 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-210ENST00000589675 TMEM63BQ5T3F8 832 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 RASIP1Q5U651 963 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 SCFD2Q8WU76 684 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 RUFY2Q8WXA3 655 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.03□□□□□ -0.322e-12■■□□□ 12
DDX39A-210ENST00000589675 UBAC1Q9BSL1 405 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 IL25Q9H293 177 aa13.03□□□□□ -0.32
DDX39A-210ENST00000589675 A6NJR5 290 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 KPNA6O60684 536 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 PTGS1P23219 599 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 CHMLP26374 656 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.33
DDX39A-210ENST00000589675 SEC23AQ15436 765 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 USH1GQ495M9 461 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 BRDTQ58F21 947 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-210ENST00000589675 TMEM240Q5SV17 173 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 IFIT1BQ5T764 474 aaKnown RBP13.02□□□□□ -0.33
DDX39A-210ENST00000589675 PSRC1Q6PGN9 363 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-210ENST00000589675 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 IWS1Q96ST2 819 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 JMJD4Q9H9V9 463 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 MRPL11Q9Y3B7 192 aaKnown RBP13.02□□□□□ -0.33
DDX39A-210ENST00000589675 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-210ENST00000589675 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.33
DDX39A-210ENST00000589675 TRANK1O15050 2925 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 CSF2RAP15509 400 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 GHRHRQ02643 423 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 TRDNQ13061 729 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 PPP2R5BQ15173 497 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 QRICH1Q2TAL8 776 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 OR6J1Q8NGC5 347 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 NSUN6Q8TEA1 469 aaKnown RBP13.01□□□□□ -0.33
DDX39A-210ENST00000589675 MTMR8Q96EF0 704 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-210ENST00000589675 TTYH1Q9H313 450 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-210ENST00000589675 HIPK3Q9H422 1215 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 IL23AQ9NPF7 189 aa13.01□□□□□ -0.33
DDX39A-210ENST00000589675 MAP3K20Q9NYL2 800 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms