RNA–Protein interactions for RNA: ENST00000589648.1

CHAF1A-207, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-207ENST00000589648 TCF20Q9UGU0 1960 aaKnown RBP17.6■□□□□ 0.41
CHAF1A-207ENST00000589648 PLA2G6O60733 806 aa17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 ZFYP08048 801 aaPredicted RBP17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 PURAQ00577 322 aaKnown RBP17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 PDE4BQ07343 736 aa17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 DUSP28Q4G0W2 176 aa17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 TSHZ3Q63HK5 1081 aa17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 NSMFQ6X4W1 530 aa17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 PRR12Q9ULL5 1215 aa17.59■□□□□ 0.41
CHAF1A-207ENST00000589648 ARHGEF15O94989 841 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 RCSD1Q6JBY9 416 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 RASGRP2Q7LDG7 609 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 ARNTL2Q8WYA1 636 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 LRFN3Q9BTN0 628 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 WDR11Q9BZH6 1224 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 POLR3EQ9NVU0 708 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 CCPG1Q9ULG6 757 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 COG5Q9UP83 839 aa17.58■□□□□ 0.4
CHAF1A-207ENST00000589648 TLL1O43897 1013 aa17.57■□□□□ 0.4
CHAF1A-207ENST00000589648 MYL3P08590 195 aa17.57■□□□□ 0.4
CHAF1A-207ENST00000589648 ACTN1P12814 892 aa17.57■□□□□ 0.4
CHAF1A-207ENST00000589648 TAP1Q03518 808 aa17.57■□□□□ 0.4
CHAF1A-207ENST00000589648 PHOSPHO2Q8TCD6 241 aa17.57■□□□□ 0.4
CHAF1A-207ENST00000589648 PPP1R13LQ8WUF5 828 aa17.57■□□□□ 0.4
CHAF1A-207ENST00000589648 SLC9A7Q96T83 725 aa17.57■□□□□ 0.4
CHAF1A-207ENST00000589648 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
CHAF1A-207ENST00000589648 PRRC2BQ5JSZ5 2229 aaKnown RBP17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 ICAM1P05362 532 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 RFC2P35250 354 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 CPT1AP50416 773 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 PPARAQ07869 468 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 BAATQ14032 418 aaPredicted RBP17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 NBPF20Q3BBV1 942 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 FAM47CQ5HY64 1035 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 HERC6Q8IVU3 1022 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 SEC62Q99442 399 aaKnown RBP17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 MTG1Q9BT17 334 aaPredicted RBP17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 IL17RBQ9NRM6 502 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 STX8Q9UNK0 236 aa17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 ARIH1Q9Y4X5 557 aaPredicted RBP17.56■□□□□ 0.4
CHAF1A-207ENST00000589648 RBM47A0AV96 593 aaKnown RBP17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 NMT2O60551 498 aa17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 ALDH5A1P51649 535 aaPredicted RBP17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 HLA-CQ95604 372 aa17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 FTOQ9C0B1 505 aaKnown RBP eCLIP17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 NAPBQ9H115 298 aa17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 INCENPQ9NQS7 918 aa17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 ADD3Q9UEY8 706 aaKnown RBP17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 MTMR7Q9Y216 660 aa17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 HCN4Q9Y3Q4 1203 aa17.55■□□□□ 0.4
CHAF1A-207ENST00000589648 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 NFIBO00712 420 aa17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 GRB10Q13322 594 aa17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 TMEM31Q5JXX7 168 aa17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 PPP4R3BQ5MIZ7 849 aa17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 SPRED2Q7Z698 418 aa17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 RETREG2Q8NC44 543 aa17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 KHSRPQ92945 711 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 GPATCH3Q96I76 525 aa17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 RANBP17Q9H2T7 1088 aaKnown RBP17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHAF1A-207ENST00000589648 LCTP09848 1927 aa17.53■□□□□ 0.4
CHAF1A-207ENST00000589648 TSPY2A6NKD2 308 aa17.53■□□□□ 0.4
CHAF1A-207ENST00000589648 KIF28PB7ZC32 967 aa17.53■□□□□ 0.4
CHAF1A-207ENST00000589648 LPXNO60711 386 aa17.53■□□□□ 0.4
CHAF1A-207ENST00000589648 TTBK2Q6IQ55 1244 aa17.53■□□□□ 0.4
CHAF1A-207ENST00000589648 NFRKBQ6P4R8 1299 aa17.53■□□□□ 0.4
CHAF1A-207ENST00000589648 SCN5AQ14524 2016 aa17.52■□□□□ 0.4
CHAF1A-207ENST00000589648 LOC102724159A0A0B4J2E5 919 aa17.52■□□□□ 0.4
CHAF1A-207ENST00000589648 SLC16A2P36021 539 aa17.52■□□□□ 0.4
CHAF1A-207ENST00000589648 PWP2Q15269 919 aaKnown RBP17.52■□□□□ 0.4
CHAF1A-207ENST00000589648 CCDC96Q2M329 555 aa17.52■□□□□ 0.4
CHAF1A-207ENST00000589648 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.4
CHAF1A-207ENST00000589648 SLC30A10Q6XR72 485 aa17.52■□□□□ 0.4
CHAF1A-207ENST00000589648 C11orf16Q9NQ32 467 aa17.52■□□□□ 0.4
CHAF1A-207ENST00000589648 PTPDC1A2A3K4 754 aa17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 A6NJR5 290 aa17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 BAIAP3O94812 1187 aa17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 NOVP48745 357 aa17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 CTDSPL2Q05D32 466 aa17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 BFSP2Q13515 415 aa17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 BRDTQ58F21 947 aaPredicted RBP17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 DCAF4Q8WV16 495 aa17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 COPS5Q92905 334 aa17.51■□□□□ 0.39
CHAF1A-207ENST00000589648 RAD50Q92878 1312 aa17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 LCHNA4D1U4 455 aa17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 FAM86C2PA6NEL3 165 aa17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 NKRFO15226 690 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 FOXP2O15409 715 aa17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 KPNA6O60684 536 aa17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 CALML3P27482 149 aa17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 PTPN11Q06124 597 aaPredicted RBP17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
CHAF1A-207ENST00000589648 ZMYM1Q5SVZ6 1142 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms