RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 PDE4DQ08499 809 aa24.86■■□□□ 1.57
CIRBP-222ENST00000589235 PDGFCQ9NRA1 345 aa24.86■■□□□ 1.57
CIRBP-222ENST00000589235 ABCB11O95342 1321 aa24.86■■□□□ 1.57
CIRBP-222ENST00000589235 RPS6P62753 249 aaKnown RBP24.85■■□□□ 1.57
CIRBP-222ENST00000589235 IRX5P78411 483 aaPredicted RBP24.85■■□□□ 1.57
CIRBP-222ENST00000589235 CDC37Q16543 378 aaPredicted RBP24.85■■□□□ 1.57
CIRBP-222ENST00000589235 USH1GQ495M9 461 aa24.85■■□□□ 1.57
CIRBP-222ENST00000589235 DUSP28Q4G0W2 176 aa24.85■■□□□ 1.57
CIRBP-222ENST00000589235 FAM109BQ6ICB4 259 aaPredicted RBP24.85■■□□□ 1.57
CIRBP-222ENST00000589235 MCF2L2Q86YR7 1114 aa24.85■■□□□ 1.57
CIRBP-222ENST00000589235 ADGRF4Q8IZF3 695 aa24.85■■□□□ 1.57
CIRBP-222ENST00000589235 PURBQ96QR8 312 aaKnown RBP24.85■■□□□ 1.57
CIRBP-222ENST00000589235 CTAGE5O15320 804 aa24.84■■□□□ 1.57
CIRBP-222ENST00000589235 TIMP1P01033 207 aa24.84■■□□□ 1.57
CIRBP-222ENST00000589235 CHMLP26374 656 aa24.84■■□□□ 1.57
CIRBP-222ENST00000589235 BRDTQ58F21 947 aaPredicted RBP24.84■■□□□ 1.57
CIRBP-222ENST00000589235 CXCL17Q6UXB2 119 aa24.84■■□□□ 1.57
CIRBP-222ENST00000589235 SLC30A10Q6XR72 485 aa24.84■■□□□ 1.57
CIRBP-222ENST00000589235 WDR11Q9BZH6 1224 aa24.84■■□□□ 1.57
CIRBP-222ENST00000589235 ERICH2A1L162 156 aa24.83■■□□□ 1.57
CIRBP-222ENST00000589235 C9orf50Q5SZB4 431 aa24.83■■□□□ 1.57
CIRBP-222ENST00000589235 NKRFO15226 690 aaKnown RBP eCLIP24.82■■□□□ 1.56
CIRBP-222ENST00000589235 ITGB8P26012 769 aa24.82■■□□□ 1.56
CIRBP-222ENST00000589235 CPT1AP50416 773 aa24.82■■□□□ 1.56
CIRBP-222ENST00000589235 Q7L0L9 218 aa24.82■■□□□ 1.56
CIRBP-222ENST00000589235 RALYLQ86SE5 291 aaKnown RBP24.82■■□□□ 1.56
CIRBP-222ENST00000589235 TMEM199Q8N511 208 aa24.82■■□□□ 1.56
CIRBP-222ENST00000589235 VAT1LQ9HCJ6 419 aa24.82■■□□□ 1.56
CIRBP-222ENST00000589235 POLR3EQ9NVU0 708 aa24.82■■□□□ 1.56
CIRBP-222ENST00000589235 MTMR10Q9NXD2 777 aa24.82■■□□□ 1.56
CIRBP-222ENST00000589235 MRPL11Q9Y3B7 192 aaKnown RBP24.82■■□□□ 1.56
CIRBP-222ENST00000589235 DDX49Q9Y6V7 483 aaKnown RBP24.82■■□□□ 1.56
CIRBP-222ENST00000589235 RBM47A0AV96 593 aaKnown RBP24.81■■□□□ 1.56
CIRBP-222ENST00000589235 PPIGQ13427 754 aaKnown RBP eCLIP24.81■■□□□ 1.562e-9■■■□□ 15.4
CIRBP-222ENST00000589235 ITGA7Q13683 1181 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 SART3Q15020 963 aaKnown RBP24.81■■□□□ 1.56
CIRBP-222ENST00000589235 ZNF697Q5TEC3 545 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 MFSD5Q6N075 450 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 FBXO11Q86XK2 927 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 FAM126BQ8IXS8 530 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 RNPC3Q96LT9 517 aaKnown RBP24.81■■□□□ 1.56
CIRBP-222ENST00000589235 IL25Q9H293 177 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 CPVLQ9H3G5 476 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 GPHNQ9NQX3 736 aaPredicted RBP24.81■■□□□ 1.56
CIRBP-222ENST00000589235 TBX21Q9UL17 535 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 LTBP2Q14767 1821 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 LAMA4Q16363 1823 aa24.81■■□□□ 1.56
CIRBP-222ENST00000589235 SMAD3P84022 425 aaKnown RBP24.8■■□□□ 1.56
CIRBP-222ENST00000589235 SCFD2Q8WU76 684 aa24.8■■□□□ 1.56
CIRBP-222ENST00000589235 STXBP5LQ9Y2K9 1186 aa24.8■■□□□ 1.56
CIRBP-222ENST00000589235 CYP21A2P08686 494 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 EDNRBP24530 442 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 TRAF1Q13077 416 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 PPP2R5BQ15173 497 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 QRICH1Q2TAL8 776 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 SLC43A3Q8NBI5 491 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 OR6J1Q8NGC5 347 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 NCOA7Q8NI08 942 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 AMNQ9BXJ7 453 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 JMJD4Q9H9V9 463 aa24.79■■□□□ 1.56
CIRBP-222ENST00000589235 MCM3APO60318 1980 aa24.78■■□□□ 1.56
CIRBP-222ENST00000589235 IFIT3O14879 490 aaKnown RBP24.78■■□□□ 1.56
CIRBP-222ENST00000589235 SGSM2O43147 1006 aa24.78■■□□□ 1.56
CIRBP-222ENST00000589235 SEC23AQ15436 765 aa24.78■■□□□ 1.56
CIRBP-222ENST00000589235 CYB5R4Q7L1T6 521 aa24.78■■□□□ 1.56
CIRBP-222ENST00000589235 NSUN6Q8TEA1 469 aaKnown RBP24.78■■□□□ 1.56
CIRBP-222ENST00000589235 KLRF2D3W0D1 207 aa24.77■■□□□ 1.56
CIRBP-222ENST00000589235 KPNA6O60684 536 aa24.77■■□□□ 1.56
CIRBP-222ENST00000589235 PTH1RQ03431 593 aa24.77■■□□□ 1.56
CIRBP-222ENST00000589235 TTLL4Q14679 1199 aa24.77■■□□□ 1.56
CIRBP-222ENST00000589235 IWS1Q96ST2 819 aa24.77■■□□□ 1.56
CIRBP-222ENST00000589235 CD4P01730 458 aa24.76■■□□□ 1.55
CIRBP-222ENST00000589235 TXNP10599 105 aaKnown RBP24.76■■□□□ 1.55
CIRBP-222ENST00000589235 SLC17A8Q8NDX2 589 aa24.76■■□□□ 1.55
CIRBP-222ENST00000589235 SYTL5Q8TDW5 730 aaPredicted RBP24.76■■□□□ 1.55
CIRBP-222ENST00000589235 MAP3K20Q9NYL2 800 aaKnown RBP24.76■■□□□ 1.55
CIRBP-222ENST00000589235 E7EWF7 191 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 MYL3P08590 195 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 SUPT20HL2P0C7V6 817 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 EPHB4P54760 987 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 WTAPQ15007 396 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 STXBP2Q15833 593 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 TMEM63BQ5T3F8 832 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 ARHGEF16Q5VV41 709 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 SAMD3Q8N6K7 520 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 RMDN3Q96TC7 470 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 PPP1R12CQ9BZL4 782 aa24.75■■□□□ 1.55
CIRBP-222ENST00000589235 SZT2Q5T011 3432 aa24.74■■□□□ 1.55
CIRBP-222ENST00000589235 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.74■■□□□ 1.55
CIRBP-222ENST00000589235 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.74■■□□□ 1.55
CIRBP-222ENST00000589235 ZBTB5O15062 677 aa24.74■■□□□ 1.55
CIRBP-222ENST00000589235 STAG2Q8N3U4 1231 aa24.74■■□□□ 1.55
CIRBP-222ENST00000589235 MAP4K1Q92918 833 aa24.74■■□□□ 1.55
CIRBP-222ENST00000589235 TAAR1Q96RJ0 339 aa24.74■■□□□ 1.55
CIRBP-222ENST00000589235 MTG1Q9BT17 334 aaPredicted RBP24.74■■□□□ 1.55
CIRBP-222ENST00000589235 HIPK3Q9H422 1215 aa24.74■■□□□ 1.55
CIRBP-222ENST00000589235 MAD2L2Q9UI95 211 aa24.74■■□□□ 1.55
CIRBP-222ENST00000589235 PALM3A6NDB9 673 aaPredicted RBP24.73■■□□□ 1.55
CIRBP-222ENST00000589235 PTGS1P23219 599 aa24.73■■□□□ 1.55
CIRBP-222ENST00000589235 PSMC6P62333 389 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms