RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 PRDM5Q9NQX1 630 aaPredicted RBP17.7■□□□□ 0.42
ERCC1-209ENST00000589214 PDGFCQ9NRA1 345 aa17.7■□□□□ 0.42
ERCC1-209ENST00000589214 PALM3A6NDB9 673 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-209ENST00000589214 CST5P28325 142 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-209ENST00000589214 GJA9P57773 515 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 MDM2Q00987 491 aaPredicted RBP17.69■□□□□ 0.42
ERCC1-209ENST00000589214 KCNA10Q16322 511 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 TLK2Q86UE8 772 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 HOMER1Q86YM7 354 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 TCEANC2Q96MN5 208 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 NEK1Q96PY6 1258 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 TSEN34Q9BSV6 310 aaKnown RBP17.69■□□□□ 0.42
ERCC1-209ENST00000589214 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 VTA1Q9NP79 307 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 STARD7Q9NQZ5 370 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
ERCC1-209ENST00000589214 MOXD2PA6NHM9 499 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-209ENST00000589214 REC8O95072 547 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 CPA1P15085 419 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 SMPD1P17405 629 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 SLC35G1Q2M3R5 365 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 CCSAPQ6IQ19 270 aaPredicted RBP17.68■□□□□ 0.42
ERCC1-209ENST00000589214 TAPT1Q6NXT6 567 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 CATIPQ7Z7H3 387 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 RAB11FIP4Q86YS3 637 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 NUP133Q8WUM0 1156 aa17.68■□□□□ 0.42
ERCC1-209ENST00000589214 LOC102724159A0A0B4J2E5 919 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 PPP1R11O60927 126 aaPredicted RBP17.67■□□□□ 0.42
ERCC1-209ENST00000589214 ASGR1P07306 291 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 HSPA4P34932 840 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 BEX3Q00994 111 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 PDE4DQ08499 809 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 TROAPQ12815 778 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 PWP2Q15269 919 aaKnown RBP17.67■□□□□ 0.42
ERCC1-209ENST00000589214 TSGA10IPQ3SY00 556 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 GNASQ5JWF2 1037 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 TMEM63BQ5T3F8 832 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 NFXL1Q6ZNB6 911 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 ZNF654Q8IZM8 581 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 PCSK9Q8NBP7 692 aaKnown RBP17.67■□□□□ 0.42
ERCC1-209ENST00000589214 TBC1D5Q92609 795 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 MPHOSPH6Q99547 160 aaKnown RBP17.67■□□□□ 0.42
ERCC1-209ENST00000589214 AMNQ9BXJ7 453 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 PDLIM7Q9NR12 457 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 GNEQ9Y223 722 aaKnown RBP17.67■□□□□ 0.42
ERCC1-209ENST00000589214 MRPL11Q9Y3B7 192 aaKnown RBP17.67■□□□□ 0.42
ERCC1-209ENST00000589214 SNX14Q9Y5W7 946 aa17.67■□□□□ 0.42
ERCC1-209ENST00000589214 A0A1W2PPC1 479 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 ZBTB5O15062 677 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 CTAGE5O15320 804 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 PQBP1O60828 265 aaKnown RBP17.66■□□□□ 0.42
ERCC1-209ENST00000589214 DDAH1O94760 285 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 BMP8BP34820 402 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 TLE2Q04725 743 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 C1orf53Q5VUE5 145 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 MCF2L2Q86YR7 1114 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 DNERQ8NFT8 737 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 SYTL5Q8TDW5 730 aaPredicted RBP17.66■□□□□ 0.42
ERCC1-209ENST00000589214 KCNB2Q92953 911 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 MTMR8Q96EF0 704 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 GLT1D1Q96MS3 346 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 PIGSQ96S52 555 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 LBHD1Q9BQE6 289 aaPredicted RBP17.66■□□□□ 0.42
ERCC1-209ENST00000589214 UBE2OQ9C0C9 1292 aaKnown RBP17.66■□□□□ 0.42
ERCC1-209ENST00000589214 AP5M1Q9H0R1 490 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 COL20A1Q9P218 1284 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 TRIOBPQ9H2D6 2365 aa17.66■□□□□ 0.42
ERCC1-209ENST00000589214 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
ERCC1-209ENST00000589214 DYNC1LI2O43237 492 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-209ENST00000589214 CYTH3O43739 400 aa17.65■□□□□ 0.42
ERCC1-209ENST00000589214 RXRAP19793 462 aa17.65■□□□□ 0.42
ERCC1-209ENST00000589214 EDNRBP24530 442 aa17.65■□□□□ 0.42
ERCC1-209ENST00000589214 EXOSC10Q01780 885 aaKnown RBP17.65■□□□□ 0.42
ERCC1-209ENST00000589214 KRT32Q14532 448 aa17.65■□□□□ 0.42
ERCC1-209ENST00000589214 IQSEC1Q6DN90 963 aa17.65■□□□□ 0.42
ERCC1-209ENST00000589214 DHX32Q7L7V1 743 aaKnown RBP17.65■□□□□ 0.42
ERCC1-209ENST00000589214 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
ERCC1-209ENST00000589214 JAKMIP1Q96N16 626 aaKnown RBP17.65■□□□□ 0.42
ERCC1-209ENST00000589214 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
ERCC1-209ENST00000589214 OPLAHO14841 1288 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 CFBP00751 764 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 LIFRP42702 1097 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 NKX3-2P78367 333 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 FSCN1Q16658 493 aaKnown RBP17.64■□□□□ 0.41
ERCC1-209ENST00000589214 SH3RF1Q7Z6J0 888 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 PIBF1Q8WXW3 757 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 VTI1AQ96AJ9 217 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 TAAR1Q96RJ0 339 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 MTA3Q9BTC8 594 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 WDR11Q9BZH6 1224 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 RIOX1Q9H6W3 641 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 PCDHA1Q9Y5I3 950 aa17.64■□□□□ 0.41
ERCC1-209ENST00000589214 B4DLN1 442 aa17.63■□□□□ 0.41
ERCC1-209ENST00000589214 CLTBP09497 229 aa17.63■□□□□ 0.41
ERCC1-209ENST00000589214 MRPL12P52815 198 aaKnown RBP17.63■□□□□ 0.41
ERCC1-209ENST00000589214 PPP2R5BQ15173 497 aa17.63■□□□□ 0.41
ERCC1-209ENST00000589214 DUSP28Q4G0W2 176 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms