RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 HOOK1Q9UJC3 728 aaKnown RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 PNMA2Q9UL42 364 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 MYH7BA7E2Y1 1941 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 ABCB11O95342 1321 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 THSD7BQ9C0I4 1608 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 TNRC18O15417 2968 aaPredicted RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 ADM5C9JUS6 153 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 PIK3CDO00329 1044 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 MEIS2O14770 477 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 OR52Z1P0C646 297 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 NF2P35240 595 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 SNAP25P60880 206 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 DGKZQ13574 1117 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 PRPF38BQ5VTL8 546 aaKnown RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 MAP1SQ66K74 1059 aaPredicted RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 KANK3Q6NY19 840 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 DTHD1Q6ZMT9 781 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 KRBA2Q6ZNG9 492 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 EMILIN3Q9NT22 766 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 USP25Q9UHP3 1055 aa13.69□□□□□ -0.22
CCBE1-203ENST00000589116 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
CCBE1-203ENST00000589116 ICAM1P05362 532 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 TXLNAP40222 546 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 IREB2P48200 963 aaKnown RBP13.68□□□□□ -0.22
CCBE1-203ENST00000589116 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 SPECC1Q5M775 1068 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 MOXD1Q6UVY6 613 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 PNMA8AQ86V59 439 aaPredicted RBP13.68□□□□□ -0.22
CCBE1-203ENST00000589116 CNNM3Q8NE01 707 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 SYMPKQ92797 1274 aaKnown RBP13.68□□□□□ -0.22
CCBE1-203ENST00000589116 AK8Q96MA6 479 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 ANO3Q9BYT9 981 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 TMEM60Q9H2L4 133 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 KIAA1468Q9P260 1216 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 ZHX2Q9Y6X8 837 aa13.68□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP11P51784 963 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 STX1AQ16623 288 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 UVSSAQ2YD98 709 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 CYP4F22Q6NT55 531 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 TANGO6Q9C0B7 1094 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 RPAP3Q9H6T3 665 aaPredicted RBP13.67□□□□□ -0.22
CCBE1-203ENST00000589116 PPP1R9AQ9ULJ8 1098 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 CSADQ9Y600 493 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
CCBE1-203ENST00000589116 RBBP6Q7Z6E9 1792 aaKnown RBP13.66□□□□□ -0.22
CCBE1-203ENST00000589116 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 OPLAHO14841 1288 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 POLR2DO15514 142 aaKnown RBP13.66□□□□□ -0.22
CCBE1-203ENST00000589116 IL17AQ16552 155 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 LONRF3Q496Y0 759 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
CCBE1-203ENST00000589116 CDCA5Q96FF9 252 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 FZD1Q9UP38 647 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 AFG3L2Q9Y4W6 797 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 PTPRFP10586 1907 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 CA12O43570 354 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 FLOT1O75955 427 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 SREBF1P36956 1147 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 VGLL4Q14135 290 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
CCBE1-203ENST00000589116 CALCRLQ16602 461 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 SH3D19Q5HYK7 790 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 USP49Q70CQ1 688 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 FAM200AQ8TCP9 573 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 CRYGNQ8WXF5 182 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 ANP32BQ92688 251 aaKnown RBP13.66□□□□□ -0.22
CCBE1-203ENST00000589116 EPSTI1Q96J88 318 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 SLC38A10Q9HBR0 1119 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 ANO10Q9NW15 660 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 TMOD4Q9NZQ9 345 aa13.66□□□□□ -0.22
CCBE1-203ENST00000589116 RLFQ13129 1914 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 CYP3A7-CYP3A51PA0A087WV96 503 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 ACTN4O43707 911 aaKnown RBP13.65□□□□□ -0.22
CCBE1-203ENST00000589116 EDIL3O43854 480 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 TDP2O95551 362 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 CYP3A7P24462 503 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 MBOAT7Q96N66 472 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 MTMR9Q96QG7 549 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 RAB34Q9BZG1 259 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 CCSER1Q9C0I3 900 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 TUBE1Q9UJT0 475 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms