RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 CUL5Q93034 780 aa17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 SHISA4Q96DD7 197 aa17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 MAF1Q9H063 256 aa17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 SRRDQ9UH36 339 aa17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 GJD2Q9UKL4 321 aa17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 GABRQQ9UN88 632 aa17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 TRIM17Q9Y577 477 aa17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 ZSWIM8A7E2V4 1837 aa17.79■□□□□ 0.44
RPRD1A-208ENST00000589050 HOXA13P31271 388 aaPredicted RBP17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 RGS2P41220 211 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 FLT3LGP49771 235 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 HSD17B4P51659 736 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 NLRP5P59047 1200 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 MAP2K5Q13163 448 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 OTOP1Q7RTM1 612 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 SAMD3Q8N6K7 520 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 USP6NLQ92738 828 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 RIC8AQ9NPQ8 531 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 TSHZ2Q9NRE2 1034 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
RPRD1A-208ENST00000589050 DNAJC25-GNG10A0A024R161 153 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 ESYT2A0FGR8 921 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 POTEB2H3BUK9 544 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 COBLO75128 1261 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 ANP32AP39687 249 aaKnown RBP17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 CNTN2Q02246 1040 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 GHRHRQ02643 423 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 TRIM29Q14134 588 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 UBE2SQ16763 222 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 USP17L6PQ6QN14 398 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 FAM177A1Q8N128 213 aaPredicted RBP17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 SYTL5Q8TDW5 730 aaPredicted RBP17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 ZMYND12Q9H0C1 365 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 GLT8D2Q9H1C3 349 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 GJB4Q9NTQ9 266 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 SLC5A4Q9NY91 659 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 KCNJ14Q9UNX9 436 aa17.77■□□□□ 0.44
RPRD1A-208ENST00000589050 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.43
RPRD1A-208ENST00000589050 PIK3CDO00329 1044 aa17.76■□□□□ 0.43
RPRD1A-208ENST00000589050 MEIS2O14770 477 aa17.76■□□□□ 0.43
RPRD1A-208ENST00000589050 CYP2B6P20813 491 aa17.76■□□□□ 0.43
RPRD1A-208ENST00000589050 GNA11P29992 359 aa17.76■□□□□ 0.43
RPRD1A-208ENST00000589050 ZNF792Q3KQV3 632 aa17.76■□□□□ 0.43
RPRD1A-208ENST00000589050 C8orf76Q96K31 380 aa17.76■□□□□ 0.43
RPRD1A-208ENST00000589050 PURBQ96QR8 312 aaKnown RBP17.76■□□□□ 0.43
RPRD1A-208ENST00000589050 APBA2Q99767 749 aa17.76■□□□□ 0.43
RPRD1A-208ENST00000589050 PCNTO95613 3336 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 ZNF236Q9UL36 1845 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 HOXC6P09630 235 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 PRMT2P55345 433 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 KRT40Q6A162 431 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 CTU1Q7Z7A3 348 aaKnown RBP17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 FAM133AQ8N9E0 248 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 NPLOC4Q8TAT6 608 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 BICD2Q8TD16 824 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 PHF20Q9BVI0 1012 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 PRDM10Q9NQV6 1147 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 COL20A1Q9P218 1284 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 PCDHA4Q9UN74 947 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 PLXNB2O15031 1838 aa17.75■□□□□ 0.43
RPRD1A-208ENST00000589050 MGAMO43451 1857 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 SOWAHBA6NEL2 793 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 GUCY1B3Q02153 619 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 TEX2Q8IWB9 1127 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 RAET1EQ8TD07 263 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 TAAR1Q96RJ0 339 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 TMEM260Q9NX78 707 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 DIS3Q9Y2L1 958 aaKnown RBP17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 MYH6P13533 1939 aa17.74■□□□□ 0.43
RPRD1A-208ENST00000589050 ADAMTS3O15072 1205 aa17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 XRCC5P13010 732 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 IRF5Q13568 498 aa17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 BLIDQ8IZY5 108 aa17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 REXO1Q8N1G1 1221 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 DAGLBQ8NCG7 672 aa17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 MAML3Q96JK9 1138 aa17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 FGD4Q96M96 766 aa17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 ADD3Q9UEY8 706 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 PTPN22Q9Y2R2 807 aa17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-208ENST00000589050 RBBP6Q7Z6E9 1792 aaKnown RBP17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 SPDYE3A6NKU9 549 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 MMP1P03956 469 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 CLK2P49760 499 aaKnown RBP17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 ALDH5A1P51649 535 aaPredicted RBP17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 NPY5RQ15761 445 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 CCL14Q16627 93 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 ARHGEF16Q5VV41 709 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 JAKMIP3Q5VZ66 844 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 DNERQ8NFT8 737 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 FBXO18Q8NFZ0 1043 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms