RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 SPRYD3Q8NCJ5 442 aa16.8■□□□□ 0.28
CNN1-208ENST00000588935 SOCS4Q8WXH5 440 aa16.8■□□□□ 0.28
CNN1-208ENST00000588935 USP6NLQ92738 828 aa16.8■□□□□ 0.28
CNN1-208ENST00000588935 TAAR1Q96RJ0 339 aa16.8■□□□□ 0.28
CNN1-208ENST00000588935 ALG1Q9BT22 464 aa16.8■□□□□ 0.28
CNN1-208ENST00000588935 PSTPIP2Q9H939 334 aa16.8■□□□□ 0.28
CNN1-208ENST00000588935 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
CNN1-208ENST00000588935 BIN2Q9UBW5 565 aaPredicted RBP16.8■□□□□ 0.28
CNN1-208ENST00000588935 PTPN22Q9Y2R2 807 aa16.8■□□□□ 0.28
CNN1-208ENST00000588935 DDX49Q9Y6V7 483 aaKnown RBP16.8■□□□□ 0.28
CNN1-208ENST00000588935 ADCY3O60266 1144 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 MYCP01106 439 aaPredicted RBP16.79■□□□□ 0.28
CNN1-208ENST00000588935 NLRP5P59047 1200 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 UBE2SQ16763 222 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 ABRAQ8N0Z2 381 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 FAM184AQ8NB25 1140 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 SMARCC2Q8TAQ2 1214 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 SYTL5Q8TDW5 730 aaPredicted RBP16.79■□□□□ 0.28
CNN1-208ENST00000588935 CUL5Q93034 780 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 SNX21Q969T3 373 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 SLC5A4Q9NY91 659 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 KCNJ14Q9UNX9 436 aa16.79■□□□□ 0.28
CNN1-208ENST00000588935 PFASO15067 1338 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 SOWAHBA6NEL2 793 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 ADAMTS3O15072 1205 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 ADCY7P51828 1080 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 GUCY1B3Q02153 619 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 ZNF792Q3KQV3 632 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 WASF1Q92558 559 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 SHISA4Q96DD7 197 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 LLPHQ9BRT6 129 aaKnown RBP16.78■□□□□ 0.28
CNN1-208ENST00000588935 TMEM260Q9NX78 707 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 FLRT1Q9NZU1 646 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 COL20A1Q9P218 1284 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 SMC3Q9UQE7 1217 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 MCM3APO60318 1980 aa16.78■□□□□ 0.28
CNN1-208ENST00000588935 STK36Q9NRP7 1315 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 DNAJC25-GNG10A0A024R161 153 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
CNN1-208ENST00000588935 PRMT2P55345 433 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 UBXN2AP68543 259 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 JAKMIP3Q5VZ66 844 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 FAM133AQ8N9E0 248 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 RGS22Q8NE09 1264 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 SH3TC2Q8TF17 1288 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 ZFP91Q96JP5 570 aaPredicted RBP16.77■□□□□ 0.28
CNN1-208ENST00000588935 PGBD1Q96JS3 809 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 APBA2Q99767 749 aa16.77■□□□□ 0.28
CNN1-208ENST00000588935 hCG_1984214I3L0E3 225 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 MEIS2O14770 477 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 EIF2AK2P19525 551 aaKnown RBP16.76■□□□□ 0.27
CNN1-208ENST00000588935 GJB2P29033 226 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 CYP2C19P33261 490 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 HSD17B4P51659 736 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 TRIM32Q13049 653 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 IRF5Q13568 498 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 PRAMEF19Q5SWL8 479 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 COL13A1Q5TAT6 717 aaPredicted RBP16.76■□□□□ 0.27
CNN1-208ENST00000588935 FBXO46Q6PJ61 603 aaPredicted RBP16.76■□□□□ 0.27
CNN1-208ENST00000588935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.76■□□□□ 0.27
CNN1-208ENST00000588935 ZNF713Q8N859 430 aaPredicted RBP16.76■□□□□ 0.27
CNN1-208ENST00000588935 CCDC12Q8WUD4 166 aaPredicted RBP16.76■□□□□ 0.27
CNN1-208ENST00000588935 TRIB2Q92519 343 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 MAML3Q96JK9 1138 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 RMDN3Q96TC7 470 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 MCOLN1Q9GZU1 580 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 C6orf50Q9HD87 102 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 RIC8AQ9NPQ8 531 aa16.76■□□□□ 0.27
CNN1-208ENST00000588935 LCTP09848 1927 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 HSP90AA1P07900 732 aaKnown RBP16.75■□□□□ 0.27
CNN1-208ENST00000588935 HOXC6P09630 235 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 XBP1P17861 261 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 GRK4P32298 578 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 HMGN5P82970 282 aaKnown RBP16.75■□□□□ 0.27
CNN1-208ENST00000588935 CUL4AQ13619 759 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 TRIM29Q14134 588 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 ARHGEF16Q5VV41 709 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 PPP1R18Q6NYC8 613 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 EEPD1Q7L9B9 569 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 CCDC148Q8NFR7 591 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 RASGRP4Q8TDF6 673 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 FGD4Q96M96 766 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
CNN1-208ENST00000588935 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.75■□□□□ 0.27
CNN1-208ENST00000588935 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
CNN1-208ENST00000588935 ASTN1O14525 1302 aa16.74■□□□□ 0.27
CNN1-208ENST00000588935 MYCLP12524 364 aaPredicted RBP16.74■□□□□ 0.27
CNN1-208ENST00000588935 XRCC5P13010 732 aaKnown RBP16.74■□□□□ 0.27
CNN1-208ENST00000588935 ALDH5A1P51649 535 aaPredicted RBP16.74■□□□□ 0.27
CNN1-208ENST00000588935 PKN2Q16513 984 aaKnown RBP16.74■□□□□ 0.27
CNN1-208ENST00000588935 SLC9C1Q4G0N8 1177 aa16.74■□□□□ 0.27
CNN1-208ENST00000588935 MFSD14CQ5VZR4 134 aa16.74■□□□□ 0.27
CNN1-208ENST00000588935 C8orf76Q96K31 380 aa16.74■□□□□ 0.27
CNN1-208ENST00000588935 ZMYND12Q9H0C1 365 aa16.74■□□□□ 0.27
CNN1-208ENST00000588935 ADD3Q9UEY8 706 aaKnown RBP16.74■□□□□ 0.27
CNN1-208ENST00000588935 PCDHA6Q9UN73 950 aa16.74■□□□□ 0.27
CNN1-208ENST00000588935 DIS3Q9Y2L1 958 aaKnown RBP16.74■□□□□ 0.27
CNN1-208ENST00000588935 PCDHA8Q9Y5H6 950 aa16.74■□□□□ 0.27
CNN1-208ENST00000588935 GNA11P29992 359 aa16.73■□□□□ 0.27
CNN1-208ENST00000588935 KRT40Q6A162 431 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms