RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CALML3P27482 149 aa21.86■■□□□ 1.09
CLPTM1-209ENST00000588855 CNTN2Q02246 1040 aa21.86■■□□□ 1.09
CLPTM1-209ENST00000588855 ZNF792Q3KQV3 632 aa21.86■■□□□ 1.09
CLPTM1-209ENST00000588855 RGS22Q8NE09 1264 aa21.86■■□□□ 1.09
CLPTM1-209ENST00000588855 SHISA4Q96DD7 197 aa21.86■■□□□ 1.09
CLPTM1-209ENST00000588855 PURBQ96QR8 312 aaKnown RBP21.86■■□□□ 1.09
CLPTM1-209ENST00000588855 ORC3Q9UBD5 711 aaPredicted RBP21.86■■□□□ 1.09
CLPTM1-209ENST00000588855 MCM3APO60318 1980 aa21.86■■□□□ 1.09
CLPTM1-209ENST00000588855 POTEB2H3BUK9 544 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 FDPSP14324 419 aaKnown RBP21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 GHRHRQ02643 423 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 CCL14Q16627 93 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 PPP1R18Q6NYC8 613 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 FBXO46Q6PJ61 603 aaPredicted RBP21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 FAM133AQ8N9E0 248 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 FGD4Q96M96 766 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 XRCC5P13010 732 aaKnown RBP21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 ELNP15502 786 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 HSD17B4P51659 736 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 SMARCC2Q8TAQ2 1214 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 SNX21Q969T3 373 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 LLPHQ9BRT6 129 aaKnown RBP21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 FLRT1Q9NZU1 646 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 VPS54Q9P1Q0 977 aa21.85■■□□□ 1.09
CLPTM1-209ENST00000588855 ASTN1O14525 1302 aa21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 ADCY3O60266 1144 aa21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 HOXA13P31271 388 aaPredicted RBP21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 PKN2Q16513 984 aaKnown RBP21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 SYTL5Q8TDW5 730 aaPredicted RBP21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 TRIB2Q92519 343 aa21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 MAML3Q96JK9 1138 aa21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 SLC5A4Q9NY91 659 aa21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 COL20A1Q9P218 1284 aa21.84■■□□□ 1.09
CLPTM1-209ENST00000588855 SOWAHBA6NEL2 793 aa21.83■■□□□ 1.09
CLPTM1-209ENST00000588855 K7ELQ4 463 aaPredicted RBP21.83■■□□□ 1.09
CLPTM1-209ENST00000588855 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.09
CLPTM1-209ENST00000588855 MAF1Q9H063 256 aa21.83■■□□□ 1.09
CLPTM1-209ENST00000588855 PSTPIP2Q9H939 334 aa21.83■■□□□ 1.09
CLPTM1-209ENST00000588855 DIS3Q9Y2L1 958 aaKnown RBP21.83■■□□□ 1.09
CLPTM1-209ENST00000588855 LRRC37A2A6NM11 1700 aa21.83■■□□□ 1.08
CLPTM1-209ENST00000588855 GCOM1H8Y6P7 765 aaPredicted RBP21.82■■□□□ 1.08
CLPTM1-209ENST00000588855 POLR2MP0CAP2 368 aa21.82■■□□□ 1.08
CLPTM1-209ENST00000588855 COL13A1Q5TAT6 717 aaPredicted RBP21.82■■□□□ 1.08
CLPTM1-209ENST00000588855 USP17L6PQ6QN14 398 aa21.82■■□□□ 1.08
CLPTM1-209ENST00000588855 SLAIN1Q8ND83 568 aa21.82■■□□□ 1.08
CLPTM1-209ENST00000588855 SMCO2A6NFE2 343 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 MEIS2O14770 477 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 GRK4P32298 578 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 ADCY7P51828 1080 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 UBE2SQ16763 222 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 HSCBQ8IWL3 235 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 SAMD3Q8N6K7 520 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 CCDC148Q8NFR7 591 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 PXYLP1Q8TE99 480 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 CCDC12Q8WUD4 166 aaPredicted RBP21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 CUL5Q93034 780 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 ALG1Q9BT22 464 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 RIC8AQ9NPQ8 531 aa21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 MAP3K20Q9NYL2 800 aaKnown RBP21.81■■□□□ 1.08
CLPTM1-209ENST00000588855 PIK3CDO00329 1044 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 CUL4AQ13619 759 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 OLFML2BQ68BL8 750 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 FCHSD1Q86WN1 690 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 SH3TC2Q8TF17 1288 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 WASF1Q92558 559 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 TAAR1Q96RJ0 339 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 ZMYND12Q9H0C1 365 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 SH3GLB2Q9NR46 395 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 GJB4Q9NTQ9 266 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 DDX49Q9Y6V7 483 aaKnown RBP21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 ESYT2A0FGR8 921 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 ADAMTS3O15072 1205 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 ALDH5A1P51649 535 aaPredicted RBP21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 HMGN5P82970 282 aaKnown RBP21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 TRIM32Q13049 653 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 SLC9C1Q4G0N8 1177 aa21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 ZNF467Q7Z7K2 595 aaPredicted RBP21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 TRMT44Q8IYL2 757 aaKnown RBP21.8■■□□□ 1.08
CLPTM1-209ENST00000588855 IGHA2P01877 340 aa21.79■■□□□ 1.08
CLPTM1-209ENST00000588855 HMGCRP04035 888 aa21.79■■□□□ 1.08
CLPTM1-209ENST00000588855 CYP2C19P33261 490 aa21.79■■□□□ 1.08
CLPTM1-209ENST00000588855 MRPL12P52815 198 aaKnown RBP21.79■■□□□ 1.08
CLPTM1-209ENST00000588855 FOSBP53539 338 aa21.79■■□□□ 1.08
CLPTM1-209ENST00000588855 TINF2Q9BSI4 451 aa21.79■■□□□ 1.08
CLPTM1-209ENST00000588855 C6orf50Q9HD87 102 aa21.79■■□□□ 1.08
CLPTM1-209ENST00000588855 ADD3Q9UEY8 706 aaKnown RBP21.79■■□□□ 1.08
CLPTM1-209ENST00000588855 NLRP5P59047 1200 aa21.78■■□□□ 1.08
CLPTM1-209ENST00000588855 DNERQ8NFT8 737 aa21.78■■□□□ 1.08
CLPTM1-209ENST00000588855 RMDN3Q96TC7 470 aa21.78■■□□□ 1.08
CLPTM1-209ENST00000588855 KCNJ14Q9UNX9 436 aa21.78■■□□□ 1.08
CLPTM1-209ENST00000588855 INHAP05111 366 aa21.77■■□□□ 1.08
CLPTM1-209ENST00000588855 MAMDC4Q6UXC1 1216 aa21.77■■□□□ 1.08
CLPTM1-209ENST00000588855 ARMCX2Q7L311 632 aa21.77■■□□□ 1.08
CLPTM1-209ENST00000588855 GLT8D2Q9H1C3 349 aa21.77■■□□□ 1.08
CLPTM1-209ENST00000588855 PXMP2Q9NR77 195 aa21.77■■□□□ 1.08
CLPTM1-209ENST00000588855 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.77■■□□□ 1.08
CLPTM1-209ENST00000588855 XBP1P17861 261 aa21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 EIF2AK2P19525 551 aaKnown RBP21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 GNA11P29992 359 aa21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 CLK2P49760 499 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms