RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 TRIM43BA6NCK2 446 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
HDAC5-209ENST00000588703 ASGR1P07306 291 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 BEX3Q00994 111 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 GRM4Q14833 912 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 TLK2Q86UE8 772 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 TDHQ8IZJ6 230 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 PCSK9Q8NBP7 692 aaKnown RBP21.03■□□□□ 0.96
HDAC5-209ENST00000588703 RGS22Q8NE09 1264 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 NUP133Q8WUM0 1156 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 TBC1D5Q92609 795 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 TRIM43Q96BQ3 446 aaPredicted RBP21.03■□□□□ 0.96
HDAC5-209ENST00000588703 MTMR8Q96EF0 704 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 VAT1LQ9HCJ6 419 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 PRDM5Q9NQX1 630 aaPredicted RBP21.03■□□□□ 0.96
HDAC5-209ENST00000588703 STARD7Q9NQZ5 370 aa21.03■□□□□ 0.96
HDAC5-209ENST00000588703 KIAA1217Q5T5P2 1943 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 KLRF2D3W0D1 207 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 DHX16O60231 1041 aaKnown RBP21.02■□□□□ 0.96
HDAC5-209ENST00000588703 EDNRBP24530 442 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 COL9A3Q14050 684 aaPredicted RBP21.02■□□□□ 0.96
HDAC5-209ENST00000588703 WTAPQ15007 396 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 GNASQ5JWF2 1037 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 IQSEC1Q6DN90 963 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 KIAA1211Q6ZU35 1233 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 NOL8Q76FK4 1167 aaKnown RBP21.02■□□□□ 0.96
HDAC5-209ENST00000588703 FBXO11Q86XK2 927 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 IGDCC4Q8TDY8 1250 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 LBHD1Q9BQE6 289 aaPredicted RBP21.02■□□□□ 0.96
HDAC5-209ENST00000588703 PRKAG2Q9UGJ0 569 aa21.02■□□□□ 0.96
HDAC5-209ENST00000588703 PQBP1O60828 265 aaKnown RBP21.01■□□□□ 0.95
HDAC5-209ENST00000588703 PPP1R11O60927 126 aaPredicted RBP21.01■□□□□ 0.95
HDAC5-209ENST00000588703 TROAPQ12815 778 aa21.01■□□□□ 0.95
HDAC5-209ENST00000588703 ANKRD33Q7Z3H0 272 aa21.01■□□□□ 0.95
HDAC5-209ENST00000588703 DNERQ8NFT8 737 aa21.01■□□□□ 0.95
HDAC5-209ENST00000588703 LRCH3Q96II8 777 aa21.01■□□□□ 0.95
HDAC5-209ENST00000588703 GPHNQ9NQX3 736 aaPredicted RBP21.01■□□□□ 0.95
HDAC5-209ENST00000588703 ELP1O95163 1332 aa21.01■□□□□ 0.95
HDAC5-209ENST00000588703 RBM47A0AV96 593 aaKnown RBP21■□□□□ 0.95
HDAC5-209ENST00000588703 ERICH2A1L162 156 aa21■□□□□ 0.95
HDAC5-209ENST00000588703 OPLAHO14841 1288 aa21■□□□□ 0.95
HDAC5-209ENST00000588703 SLC27A2O14975 620 aa21■□□□□ 0.95
HDAC5-209ENST00000588703 DYNC1LI2O43237 492 aaPredicted RBP21■□□□□ 0.95
HDAC5-209ENST00000588703 CLTBP09497 229 aa21■□□□□ 0.95
HDAC5-209ENST00000588703 ITGB8P26012 769 aa21■□□□□ 0.95
HDAC5-209ENST00000588703 SART3Q15020 963 aaKnown RBP21■□□□□ 0.95
HDAC5-209ENST00000588703 FSCN1Q16658 493 aaKnown RBP21■□□□□ 0.95
HDAC5-209ENST00000588703 TMEM67Q5HYA8 995 aa21■□□□□ 0.95
HDAC5-209ENST00000588703 GLT1D1Q96MS3 346 aa21■□□□□ 0.95
HDAC5-209ENST00000588703 COL20A1Q9P218 1284 aa21■□□□□ 0.95
HDAC5-209ENST00000588703 CDK7P50613 346 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 NECTIN1Q15223 517 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 DUSP28Q4G0W2 176 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 SYTL5Q8TDW5 730 aaPredicted RBP20.99■□□□□ 0.95
HDAC5-209ENST00000588703 BADQ92934 168 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 TOX2Q96NM4 488 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 MAF1Q9H063 256 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 AP5M1Q9H0R1 490 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 LY9Q9HBG7 655 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 ANO2Q9NQ90 1003 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 MRPL11Q9Y3B7 192 aaKnown RBP20.99■□□□□ 0.95
HDAC5-209ENST00000588703 Q9Y3F1 56 aa20.99■□□□□ 0.95
HDAC5-209ENST00000588703 ZBTB5O15062 677 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 KIAA0355O15063 1070 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 CYTH3O43739 400 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 PDE4DQ08499 809 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 FAAP100Q0VG06 881 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 LRIT3Q3SXY7 679 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 CREB3L3Q68CJ9 461 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 CXCL17Q6UXB2 119 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 TAAR1Q96RJ0 339 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 AMNQ9BXJ7 453 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 WDR11Q9BZH6 1224 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 RIOX1Q9H6W3 641 aa20.98■□□□□ 0.95
HDAC5-209ENST00000588703 A0A0U1RQG5 324 aaPredicted RBP20.97■□□□□ 0.95
HDAC5-209ENST00000588703 PRC1O43663 620 aa20.97■□□□□ 0.95
HDAC5-209ENST00000588703 MCF2L2Q86YR7 1114 aa20.97■□□□□ 0.95
HDAC5-209ENST00000588703 SCN10AQ9Y5Y9 1956 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 ARVCFO00192 962 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 GHRHRQ02643 423 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 CATIPQ7Z7H3 387 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 HOMER1Q86YM7 354 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 ZNF654Q8IZM8 581 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 VTI1AQ96AJ9 217 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 CCDC136Q96JN2 1154 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 PIGSQ96S52 555 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 MPHOSPH6Q99547 160 aaKnown RBP20.96■□□□□ 0.95
HDAC5-209ENST00000588703 MTA3Q9BTC8 594 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 MYL10Q9BUA6 226 aa20.96■□□□□ 0.95
HDAC5-209ENST00000588703 DCDC2CA8MYV0 355 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 SH2B2O14492 632 aaPredicted RBP20.95■□□□□ 0.94
HDAC5-209ENST00000588703 MCM5P33992 734 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 HSD17B4P51659 736 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 CASC1Q6TDU7 716 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 FAM126BQ8IXS8 530 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 SLC43A3Q8NBI5 491 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 SCFD2Q8WU76 684 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 TMEM39AQ9NV64 488 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 TBX21Q9UL17 535 aa20.95■□□□□ 0.94
HDAC5-209ENST00000588703 PCDHA1Q9Y5I3 950 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms