RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SUPT20HL2P0C7V6 817 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 POU3F3P20264 500 aaPredicted RBP18.15■□□□□ 0.5
IFT20-216ENST00000588477 PDE4BQ07343 736 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 KRT40Q6A162 431 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 NSMFQ6X4W1 530 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 GMCL1Q96IK5 515 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 EPHX3Q9H6B9 360 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 VTA1Q9NP79 307 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 TNKSO95271 1327 aa18.15■□□□□ 0.5
IFT20-216ENST00000588477 EPOPA6NHQ4 379 aa18.14■□□□□ 0.49
IFT20-216ENST00000588477 DUSP28Q4G0W2 176 aa18.14■□□□□ 0.49
IFT20-216ENST00000588477 POLR3EQ9NVU0 708 aa18.14■□□□□ 0.49
IFT20-216ENST00000588477 PRR12Q9ULL5 1215 aa18.14■□□□□ 0.49
IFT20-216ENST00000588477 PLA2G6O60733 806 aa18.13■□□□□ 0.49
IFT20-216ENST00000588477 ZFYP08048 801 aaPredicted RBP18.13■□□□□ 0.49
IFT20-216ENST00000588477 MYL3P08590 195 aa18.13■□□□□ 0.49
IFT20-216ENST00000588477 ACTN1P12814 892 aa18.13■□□□□ 0.49
IFT20-216ENST00000588477 PURAQ00577 322 aaKnown RBP18.13■□□□□ 0.49
IFT20-216ENST00000588477 RCSD1Q6JBY9 416 aa18.13■□□□□ 0.49
IFT20-216ENST00000588477 MORC4Q8TE76 937 aa18.13■□□□□ 0.49
IFT20-216ENST00000588477 LRFN3Q9BTN0 628 aa18.13■□□□□ 0.49
IFT20-216ENST00000588477 CCPG1Q9ULG6 757 aa18.13■□□□□ 0.49
IFT20-216ENST00000588477 STX8Q9UNK0 236 aa18.13■□□□□ 0.49
IFT20-216ENST00000588477 SLC3A2P08195 630 aaKnown RBP18.12■□□□□ 0.49
IFT20-216ENST00000588477 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
IFT20-216ENST00000588477 FAM47CQ5HY64 1035 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 TSHZ3Q63HK5 1081 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 RASGRP2Q7LDG7 609 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 PPP1R13LQ8WUF5 828 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 ARNTL2Q8WYA1 636 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 SLC9A7Q96T83 725 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 SEC62Q99442 399 aaKnown RBP18.12■□□□□ 0.49
IFT20-216ENST00000588477 WDR11Q9BZH6 1224 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 NACAP1Q9BZK3 213 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 CHMP4BQ9H444 224 aaKnown RBP18.12■□□□□ 0.49
IFT20-216ENST00000588477 GPHNQ9NQX3 736 aaPredicted RBP18.12■□□□□ 0.49
IFT20-216ENST00000588477 COG5Q9UP83 839 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 MTMR7Q9Y216 660 aa18.12■□□□□ 0.49
IFT20-216ENST00000588477 TLL1O43897 1013 aa18.11■□□□□ 0.49
IFT20-216ENST00000588477 ARHGEF15O94989 841 aa18.11■□□□□ 0.49
IFT20-216ENST00000588477 CPT1AP50416 773 aa18.11■□□□□ 0.49
IFT20-216ENST00000588477 ALDH5A1P51649 535 aaPredicted RBP18.11■□□□□ 0.49
IFT20-216ENST00000588477 TAP1Q03518 808 aa18.11■□□□□ 0.49
IFT20-216ENST00000588477 PPARAQ07869 468 aa18.11■□□□□ 0.49
IFT20-216ENST00000588477 PHOSPHO2Q8TCD6 241 aa18.11■□□□□ 0.49
IFT20-216ENST00000588477 FTOQ9C0B1 505 aaKnown RBP eCLIP18.11■□□□□ 0.49
IFT20-216ENST00000588477 NAPBQ9H115 298 aa18.11■□□□□ 0.49
IFT20-216ENST00000588477 ADD3Q9UEY8 706 aaKnown RBP18.11■□□□□ 0.49
IFT20-216ENST00000588477 MYH7BA7E2Y1 1941 aa18.11■□□□□ 0.49
IFT20-216ENST00000588477 IQCF3P0C7M6 154 aa18.1■□□□□ 0.49
IFT20-216ENST00000588477 RFC2P35250 354 aa18.1■□□□□ 0.49
IFT20-216ENST00000588477 BAATQ14032 418 aaPredicted RBP18.1■□□□□ 0.49
IFT20-216ENST00000588477 NBPF20Q3BBV1 942 aa18.1■□□□□ 0.49
IFT20-216ENST00000588477 OR6J1Q8NGC5 347 aa18.1■□□□□ 0.49
IFT20-216ENST00000588477 HLA-CQ95604 372 aa18.1■□□□□ 0.49
IFT20-216ENST00000588477 GPATCH3Q96I76 525 aa18.1■□□□□ 0.49
IFT20-216ENST00000588477 MTG1Q9BT17 334 aaPredicted RBP18.1■□□□□ 0.49
IFT20-216ENST00000588477 HCN4Q9Y3Q4 1203 aa18.1■□□□□ 0.49
IFT20-216ENST00000588477 KIAA1217Q5T5P2 1943 aa18.1■□□□□ 0.49
IFT20-216ENST00000588477 SIP14410 1827 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 TSPY2A6NKD2 308 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 NMT2O60551 498 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 ICAM1P05362 532 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 PPP4R3BQ5MIZ7 849 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 HERC6Q8IVU3 1022 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 RETREG2Q8NC44 543 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 IL17RBQ9NRM6 502 aa18.09■□□□□ 0.49
IFT20-216ENST00000588477 MYH6P13533 1939 aa18.08■□□□□ 0.49
IFT20-216ENST00000588477 RBM47A0AV96 593 aaKnown RBP18.08■□□□□ 0.48
IFT20-216ENST00000588477 PTPDC1A2A3K4 754 aa18.08■□□□□ 0.48
IFT20-216ENST00000588477 CTDSPL2Q05D32 466 aa18.08■□□□□ 0.48
IFT20-216ENST00000588477 GRB10Q13322 594 aa18.08■□□□□ 0.48
IFT20-216ENST00000588477 CCDC96Q2M329 555 aa18.08■□□□□ 0.48
IFT20-216ENST00000588477 TMEM31Q5JXX7 168 aa18.08■□□□□ 0.48
IFT20-216ENST00000588477 ARIH1Q9Y4X5 557 aaPredicted RBP18.08■□□□□ 0.48
IFT20-216ENST00000588477 PITPNM1O00562 1244 aa18.07■□□□□ 0.48
IFT20-216ENST00000588477 NFIBO00712 420 aa18.07■□□□□ 0.48
IFT20-216ENST00000588477 SLC16A2P36021 539 aa18.07■□□□□ 0.48
IFT20-216ENST00000588477 LRRFIP1Q32MZ4 808 aaKnown RBP18.07■□□□□ 0.48
IFT20-216ENST00000588477 BRDTQ58F21 947 aaPredicted RBP18.07■□□□□ 0.48
IFT20-216ENST00000588477 TTBK2Q6IQ55 1244 aa18.07■□□□□ 0.48
IFT20-216ENST00000588477 NFRKBQ6P4R8 1299 aa18.07■□□□□ 0.48
IFT20-216ENST00000588477 SPRED2Q7Z698 418 aa18.07■□□□□ 0.48
IFT20-216ENST00000588477 KHSRPQ92945 711 aaKnown RBP eCLIP18.07■□□□□ 0.48
IFT20-216ENST00000588477 RANBP17Q9H2T7 1088 aaKnown RBP18.07■□□□□ 0.48
IFT20-216ENST00000588477 LOC102724159A0A0B4J2E5 919 aa18.06■□□□□ 0.48
IFT20-216ENST00000588477 CALML3P27482 149 aa18.06■□□□□ 0.48
IFT20-216ENST00000588477 CHMP4BP1P59074 171 aa18.06■□□□□ 0.48
IFT20-216ENST00000588477 BFSP2Q13515 415 aa18.06■□□□□ 0.48
IFT20-216ENST00000588477 PWP2Q15269 919 aaKnown RBP18.06■□□□□ 0.48
IFT20-216ENST00000588477 COPS5Q92905 334 aa18.06■□□□□ 0.48
IFT20-216ENST00000588477 NOD1Q9Y239 953 aa18.06■□□□□ 0.48
IFT20-216ENST00000588477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.06■□□□□ 0.48
IFT20-216ENST00000588477 BRWD1Q9NSI6 2320 aa18.06■□□□□ 0.48
IFT20-216ENST00000588477 RAD50Q92878 1312 aa18.05■□□□□ 0.48
IFT20-216ENST00000588477 RANBP6O60518 1105 aaKnown RBP18.05■□□□□ 0.48
IFT20-216ENST00000588477 LPXNO60711 386 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms