RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 RXRAP19793 462 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L24Q0WX57 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 TRIM29Q14134 588 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 PHKBQ93100 1093 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 R3HDMLQ9H3Y0 253 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.61■□□□□ 0.25
CCDC43-203ENST00000588210 FAM217BQ9NTX9 383 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-203ENST00000588210 CUTAO60888 179 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 SFPQP23246 707 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC43-203ENST00000588210 CBX1P83916 185 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 GNL2Q13823 731 aaKnown RBP16.61■□□□□ 0.25
CCDC43-203ENST00000588210 TMEM67Q5HYA8 995 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 KIF18AQ8NI77 898 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 PKNOX2Q96KN3 472 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 ASCC2Q9H1I8 757 aaPredicted RBP16.61■□□□□ 0.25
CCDC43-203ENST00000588210 HSD3B7Q9H2F3 369 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 MYH4Q9Y623 1939 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 F5H6K3 240 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 GPR25O00155 361 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 WDR46O15213 610 aaKnown RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 LBX1P52954 281 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 IRX3P78415 501 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 FANCCQ00597 558 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 KLRC3Q07444 240 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 KIAA1755Q5JYT7 1200 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 UTP14CQ5TAP6 766 aaKnown RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 E4F1Q66K89 784 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 NFXL1Q6ZNB6 911 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 CATSPERGQ6ZRH7 1159 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 DGKHQ86XP1 1220 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 GMCL1P1Q8NEA9 526 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 SMCR8Q8TEV9 937 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 RPAP3Q9H6T3 665 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 TRMT1Q9NXH9 659 aaKnown RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 NRDCO43847 1150 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 FMNL1O95466 1100 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 MYL5Q02045 173 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 ELOA2Q8IYF1 753 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 SPICE1Q8N0Z3 855 aa16.6■□□□□ 0.25
CCDC43-203ENST00000588210 ZSCAN10Q96SZ4 725 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-203ENST00000588210 ADGRA2Q96PE1 1338 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 RAD21O60216 631 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 TOP1P11387 765 aaKnown RBP16.59■□□□□ 0.25
CCDC43-203ENST00000588210 ZSCAN20P17040 1043 aaPredicted RBP16.59■□□□□ 0.25
CCDC43-203ENST00000588210 DMTNQ08495 405 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 LRRC47Q8N1G4 583 aaKnown RBP16.59■□□□□ 0.25
CCDC43-203ENST00000588210 WASF1Q92558 559 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 PPP1R13BQ96KQ4 1090 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 ZKSCAN3Q9BRR0 538 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 UBAC1Q9BSL1 405 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 PRDM4Q9UKN5 801 aa16.59■□□□□ 0.25
CCDC43-203ENST00000588210 CBFA2T2O43439 604 aa16.58■□□□□ 0.25
CCDC43-203ENST00000588210 TUBB4AP04350 444 aa16.58■□□□□ 0.25
CCDC43-203ENST00000588210 SSRP1Q08945 709 aaKnown RBP16.58■□□□□ 0.25
CCDC43-203ENST00000588210 RCSD1Q6JBY9 416 aa16.58■□□□□ 0.25
CCDC43-203ENST00000588210 C17orf99Q6UX52 265 aa16.58■□□□□ 0.25
CCDC43-203ENST00000588210 ANKS1AQ92625 1134 aa16.58■□□□□ 0.25
CCDC43-203ENST00000588210 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.25
CCDC43-203ENST00000588210 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.25
CCDC43-203ENST00000588210 ZNF215Q9UL58 517 aaPredicted RBP16.58■□□□□ 0.25
CCDC43-203ENST00000588210 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.25
CCDC43-203ENST00000588210 NDUFB10O96000 172 aa16.58■□□□□ 0.24
CCDC43-203ENST00000588210 IFNAR1P17181 557 aa16.58■□□□□ 0.24
CCDC43-203ENST00000588210 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.24
CCDC43-203ENST00000588210 NAA30Q147X3 362 aaPredicted RBP16.58■□□□□ 0.24
CCDC43-203ENST00000588210 GTF3C2Q8WUA4 911 aaPredicted RBP16.58■□□□□ 0.24
CCDC43-203ENST00000588210 P2RX7Q99572 595 aaKnown RBP16.58■□□□□ 0.24
CCDC43-203ENST00000588210 TANGO6Q9C0B7 1094 aa16.58■□□□□ 0.24
CCDC43-203ENST00000588210 TNKSO95271 1327 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 IFIT3O14879 490 aaKnown RBP16.57■□□□□ 0.24
CCDC43-203ENST00000588210 FKTNO75072 461 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 HERVK_113P62684 666 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 SP3Q02447 781 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 PNOCQ13519 176 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 COG2Q14746 738 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 KRBA2Q6ZNG9 492 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-203ENST00000588210 MTA3Q9BTC8 594 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 MYL10Q9BUA6 226 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 SLC26A6Q9BXS9 759 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 HOXC10Q9NYD6 342 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 OGFRQ9NZT2 677 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 CPA4Q9UI42 421 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 SLU7O95391 586 aaKnown RBP16.57■□□□□ 0.24
CCDC43-203ENST00000588210 BCRP11274 1271 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 ATP1A3P13637 1013 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 SART3Q15020 963 aaKnown RBP16.57■□□□□ 0.24
CCDC43-203ENST00000588210 NOSTRINQ8IVI9 506 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-203ENST00000588210 ZNF397Q8NF99 534 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-203ENST00000588210 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 CLIC6Q96NY7 704 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 L2HGDHQ9H9P8 463 aa16.57■□□□□ 0.24
CCDC43-203ENST00000588210 ERICH2A1L162 156 aa16.56■□□□□ 0.24
CCDC43-203ENST00000588210 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
CCDC43-203ENST00000588210 CCP110O43303 1012 aa16.56■□□□□ 0.24
CCDC43-203ENST00000588210 MMP1P03956 469 aa16.56■□□□□ 0.24
CCDC43-203ENST00000588210 FAM83BQ5T0W9 1011 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms