RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 RPS6KB1P23443 525 aa11.71□□□□□ -0.53
TPM4-207ENST00000588032 CALML3P27482 149 aa11.71□□□□□ -0.53
TPM4-207ENST00000588032 GHRHRQ02643 423 aa11.71□□□□□ -0.53
TPM4-207ENST00000588032 HOMER1Q86YM7 354 aa11.71□□□□□ -0.53
TPM4-207ENST00000588032 PAWRQ96IZ0 340 aaKnown RBP11.71□□□□□ -0.53
TPM4-207ENST00000588032 PIGSQ96S52 555 aa11.71□□□□□ -0.53
TPM4-207ENST00000588032 C11orf49Q9H6J7 331 aa11.71□□□□□ -0.53
TPM4-207ENST00000588032 ZSWIM6Q9HCJ5 1215 aa11.71□□□□□ -0.53
TPM4-207ENST00000588032 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.53
TPM4-207ENST00000588032 CCDC196A0A1B0GTZ2 297 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 DUSP11O75319 330 aaKnown RBP11.7□□□□□ -0.54
TPM4-207ENST00000588032 TAL1P17542 331 aaPredicted RBP11.7□□□□□ -0.54
TPM4-207ENST00000588032 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
TPM4-207ENST00000588032 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
TPM4-207ENST00000588032 ALDH5A1P51649 535 aaPredicted RBP11.7□□□□□ -0.54
TPM4-207ENST00000588032 ANAPC15P60006 121 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 SLC35G1Q2M3R5 365 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 IQSEC1Q6DN90 963 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 Q6ZUG5 572 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 RUFY3Q7L099 469 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 MICU3Q86XE3 530 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 NSUN6Q8TEA1 469 aaKnown RBP11.7□□□□□ -0.54
TPM4-207ENST00000588032 TCEANC2Q96MN5 208 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 AGXT2Q9BYV1 514 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 VTA1Q9NP79 307 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 ZHX1Q9UKY1 873 aaPredicted RBP11.7□□□□□ -0.54
TPM4-207ENST00000588032 BRPF3Q9ULD4 1205 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 CYP46A1Q9Y6A2 500 aa11.7□□□□□ -0.54
TPM4-207ENST00000588032 ASTN1O14525 1302 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 KLF18A0A0U1RQI7 1052 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 KBTBD13C9JR72 458 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
TPM4-207ENST00000588032 CFBP00751 764 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 COL6A1P12109 1028 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 RXRAP19793 462 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 HSD17B4P51659 736 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 RTN1Q16799 776 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 CCDC144BQ3MJ40 725 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 SLC30A10Q6XR72 485 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 RNF180Q86T96 592 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 SRBD1Q8N5C6 995 aaKnown RBP11.69□□□□□ -0.54
TPM4-207ENST00000588032 SYTL5Q8TDW5 730 aaPredicted RBP11.69□□□□□ -0.54
TPM4-207ENST00000588032 DPF3Q92784 378 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 IWS1Q96ST2 819 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 KATNBL1Q9H079 304 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 SPC25Q9HBM1 224 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 XPNPEP3Q9NQH7 507 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 Q9Y3F1 56 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 PLXNA1Q9UIW2 1896 aa11.69□□□□□ -0.54
TPM4-207ENST00000588032 GCOM1H8Y6P7 765 aaPredicted RBP11.68□□□□□ -0.54
TPM4-207ENST00000588032 PLEKHA8P1O95397 391 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 POLR2MP0CAP2 368 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 CPA1P15085 419 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 EDNRBP24530 442 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 EVCP57679 992 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 TNFAIP2Q03169 654 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 PDE4DQ08499 809 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 TEX2Q8IWB9 1127 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 DIS3LQ8TF46 1054 aaKnown RBP11.68□□□□□ -0.54
TPM4-207ENST00000588032 TBC1D5Q92609 795 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 BRF1Q92994 677 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 PURBQ96QR8 312 aaKnown RBP11.68□□□□□ -0.54
TPM4-207ENST00000588032 TSEN34Q9BSV6 310 aaKnown RBP11.68□□□□□ -0.54
TPM4-207ENST00000588032 NR2E3Q9Y5X4 410 aa11.68□□□□□ -0.54
TPM4-207ENST00000588032 HTTP42858 3142 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 RBM47A0AV96 593 aaKnown RBP11.67□□□□□ -0.54
TPM4-207ENST00000588032 GOLGA8AA7E2F4 631 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 GOLGA8BA8MQT2 603 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 OPLAHO14841 1288 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 METAP2P50579 478 aaKnown RBP eCLIP11.67□□□□□ -0.54
TPM4-207ENST00000588032 NKX3-2P78367 333 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 APOBRQ0VD83 1088 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 LRRC41Q15345 812 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 STXBP2Q15833 593 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
TPM4-207ENST00000588032 ARHGEF16Q5VV41 709 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 ANO1Q5XXA6 986 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 TAPT1Q6NXT6 567 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 PIBF1Q8WXW3 757 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 CUL5Q93034 780 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 IL17RAQ96F46 866 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 TAAR1Q96RJ0 339 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 RMDN3Q96TC7 470 aa11.67□□□□□ -0.54
TPM4-207ENST00000588032 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
TPM4-207ENST00000588032 NAP1L2Q9ULW6 460 aaPredicted RBP11.67□□□□□ -0.54
TPM4-207ENST00000588032 hCG_1984214I3L0E3 225 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 PIK3CDO00329 1044 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 NKRFO15226 690 aaKnown RBP eCLIP11.66□□□□□ -0.54
TPM4-207ENST00000588032 EVI5O60447 810 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 ADAMTS4O75173 837 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 PGK1P00558 417 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 CST5P28325 142 aaPredicted RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 GJA9P57773 515 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 NOL8Q76FK4 1167 aaKnown RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 RAB11FIP4Q86YS3 637 aa11.66□□□□□ -0.54
TPM4-207ENST00000588032 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
TPM4-207ENST00000588032 CMTR1Q8N1G2 835 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms