RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 IFNGR1P15260 489 aa7.35□□□□□ -1.23
TUBD1-208ENST00000588009 SKOR2Q2VWA4 1001 aaPredicted RBP7.35□□□□□ -1.23
TUBD1-208ENST00000588009 E4F1Q66K89 784 aaPredicted RBP7.35□□□□□ -1.23
TUBD1-208ENST00000588009 CLEC10AQ8IUN9 316 aa7.35□□□□□ -1.23
TUBD1-208ENST00000588009 GATA6Q92908 595 aa7.35□□□□□ -1.23
TUBD1-208ENST00000588009 TCTN2Q96GX1 697 aa7.35□□□□□ -1.23
TUBD1-208ENST00000588009 CCDC136Q96JN2 1154 aa7.35□□□□□ -1.23
TUBD1-208ENST00000588009 GPR62Q9BZJ7 368 aa7.35□□□□□ -1.23
TUBD1-208ENST00000588009 PUS7LQ9H0K6 701 aaKnown RBP7.35□□□□□ -1.23
TUBD1-208ENST00000588009 CCDC8Q9H0W5 538 aaPredicted RBP7.35□□□□□ -1.23
TUBD1-208ENST00000588009 CAPN6Q9Y6Q1 641 aa7.35□□□□□ -1.23
TUBD1-208ENST00000588009 CCDC194A0A1B0GVG4 234 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 ARVCFO00192 962 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 DHX15O43143 795 aaKnown RBP7.34□□□□□ -1.23
TUBD1-208ENST00000588009 TSPAN6O43657 245 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 SRFP11831 508 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 PLS3P13797 630 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 VAV1P15498 845 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 BMP8BP34820 402 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 LTBRP36941 435 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 ID4P47928 161 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 SEPHS1P49903 392 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 NEK2P51955 445 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 TMPRSS15P98073 1019 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 PPP2R5AQ15172 486 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.34□□□□□ -1.23
TUBD1-208ENST00000588009 MTMR8Q96EF0 704 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 SLC12A9Q9BXP2 914 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 TRIM8Q9BZR9 551 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 DUSP15Q9H1R2 295 aaPredicted RBP7.34□□□□□ -1.23
TUBD1-208ENST00000588009 GABBR1Q9UBS5 961 aa7.34□□□□□ -1.23
TUBD1-208ENST00000588009 CBX4O00257 560 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 MSCO60682 206 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 GLRX3O76003 335 aaKnown RBP7.33□□□□□ -1.24
TUBD1-208ENST00000588009 F2P00734 622 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 PYGMP11217 842 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 ADMP35318 185 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 RCSD1Q6JBY9 416 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 LBX2Q6XYB7 198 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 TXNRD3Q86VQ6 643 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 CCDC103Q8IW40 242 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 ZC3H7AQ8IWR0 971 aaKnown RBP7.33□□□□□ -1.24
TUBD1-208ENST00000588009 NXPE1Q8N323 547 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 MFSD4AQ8N468 514 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 IGSF22Q8N9C0 903 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 PCDH19Q8TAB3 1148 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 SMAD5Q99717 465 aaKnown RBP7.33□□□□□ -1.24
TUBD1-208ENST00000588009 FAM83CQ9BQN1 747 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 CLEC1BQ9P126 229 aa7.33□□□□□ -1.24
TUBD1-208ENST00000588009 APOBEC2Q9Y235 224 aaKnown RBP7.33□□□□□ -1.24
TUBD1-208ENST00000588009 SHTN1A0MZ66 631 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 ZNF891A8MT65 544 aaPredicted RBP7.32□□□□□ -1.24
TUBD1-208ENST00000588009 M0R2C6 588 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 CKMP06732 381 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 SRGAP2CP0DJJ0 459 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 LCP1P13796 627 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 GATA4P43694 442 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 RAB27AP51159 221 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 TBX4P57082 545 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 PAK1Q13153 545 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 KCNAB2Q13303 367 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 SART3Q15020 963 aaKnown RBP7.32□□□□□ -1.24
TUBD1-208ENST00000588009 LRRC41Q15345 812 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 CYP27C1Q4G0S4 372 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 IQCEQ6IPM2 695 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 ZAR1Q86SH2 424 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 KSR1Q8IVT5 923 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 WDR75Q8IWA0 830 aaKnown RBP7.32□□□□□ -1.24
TUBD1-208ENST00000588009 CNTD1Q8N815 330 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 COG1Q8WTW3 980 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 DIO2Q92813 273 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 TBC1D32Q96NH3 1257 aa7.32□□□□□ -1.24
TUBD1-208ENST00000588009 GNAT3A8MTJ3 354 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 TRAF5O00463 557 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 AKAP10O43572 662 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 PRC1O43663 620 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 ZNF205O95201 554 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 ADCYAP1R1P41586 468 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 CHRNA4P43681 627 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 DSG1Q02413 1049 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 EEF1DP3Q658K8 133 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 SMC1BQ8NDV3 1235 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 RELTQ969Z4 430 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 YIPF4Q9BSR8 244 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 ALG1Q9BT22 464 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 CRTAC1Q9NQ79 661 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 TRHDEQ9UKU6 1024 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 COQ6Q9Y2Z9 468 aa7.31□□□□□ -1.24
TUBD1-208ENST00000588009 FAM155AB1AL88 458 aaPredicted RBP7.3□□□□□ -1.24
TUBD1-208ENST00000588009 WDR64B1ANS9 1081 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 FKBP9O95302 570 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 GSTM1P09488 218 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 IL2P60568 153 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 RTP2Q5QGT7 225 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 SYDE2Q5VT97 1194 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 FKBP9P1Q75LS8 142 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 Q8N3U1 123 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 USHBP1Q8N6Y0 703 aa7.3□□□□□ -1.24
TUBD1-208ENST00000588009 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms