RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ADAM21Q9UKJ8 722 aa10.82□□□□□ -0.68
LINC01539-201ENST00000587904 BRCA1P38398 1863 aaKnown RBP10.82□□□□□ -0.68
LINC01539-201ENST00000587904 DDTLA6NHG4 134 aaPredicted RBP10.81□□□□□ -0.68
LINC01539-201ENST00000587904 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 CDC25BP30305 580 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 MNAT1P51948 309 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 CERKLQ49MI3 558 aaPredicted RBP10.81□□□□□ -0.68
LINC01539-201ENST00000587904 FKBP1CQ5VVH2 108 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 TYW1BQ6NUM6 668 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 ZSCAN29Q8IWY8 852 aaPredicted RBP10.81□□□□□ -0.68
LINC01539-201ENST00000587904 NIM1KQ8IY84 436 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 LRRC47Q8N1G4 583 aaKnown RBP10.81□□□□□ -0.68
LINC01539-201ENST00000587904 OGFOD1Q8N543 542 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 DCAF4Q8WV16 495 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 CSRNP2Q9H175 543 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 PRDM16Q9HAZ2 1276 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 HERC5Q9UII4 1024 aaKnown RBP10.81□□□□□ -0.68
LINC01539-201ENST00000587904 ZNRF3Q9ULT6 936 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 PCDHA6Q9UN73 950 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 MTMR7Q9Y216 660 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 PCDHA8Q9Y5H6 950 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 BAZ2BQ9UIF8 2168 aaKnown RBP10.81□□□□□ -0.68
LINC01539-201ENST00000587904 COL4A5P29400 1685 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 VEGFAP15692 232 aaPredicted RBP10.81□□□□□ -0.68
LINC01539-201ENST00000587904 TCP10Q12799 353 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 PTGDRQ13258 359 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 NEDD9Q14511 834 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 AP1ARQ63HQ0 302 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 SH3BP5LQ7L8J4 393 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 ZFPM1Q8IX07 1006 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 MTMR14Q8NCE2 650 aa10.81□□□□□ -0.68
LINC01539-201ENST00000587904 TDRD3Q9H7E2 651 aaKnown RBP10.81□□□□□ -0.68
LINC01539-201ENST00000587904 PSMD14O00487 310 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 EIF3JO75822 258 aaKnown RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 SCP2P22307 547 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 ELF1P32519 619 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 LONP1P36776 959 aaKnown RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 CACNB3P54284 484 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 ICA1Q05084 483 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 GRIN1Q05586 938 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 DLGAP5Q15398 846 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 ZNF174Q15697 407 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 LONRF3Q496Y0 759 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 TRIML1Q8N9V2 468 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 PIGSQ96S52 555 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 ZNF277Q9NRM2 450 aaPredicted RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 PCDHAC2Q9Y5I4 1007 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 FER1L6Q2WGJ9 1857 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 ARFGEF1Q9Y6D6 1849 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 PNMA6FA0A0J9YX94 578 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 IKBKBO14920 756 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 POLR2DO15514 142 aaKnown RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 GCFC2P16383 781 aaKnown RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 PRPHP41219 470 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 TRAF1Q13077 416 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 CRYMQ14894 314 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 POSTNQ15063 836 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 NONOQ15233 471 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 ERCC6LQ2NKX8 1250 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 DPCR1Q3MIW9 517 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 ARHGAP29Q52LW3 1261 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 DALRD3Q5D0E6 543 aaKnown RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 NT5DC1Q5TFE4 455 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 GBP6Q6ZN66 633 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 PLA2G4DQ86XP0 818 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 DHX40Q8IX18 779 aaKnown RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 REXO1Q8N1G1 1221 aaKnown RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 MSL3Q8N5Y2 521 aaKnown RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
LINC01539-201ENST00000587904 SH3GL3Q99963 347 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 GLT8D2Q9H1C3 349 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 RPS6KL1Q9Y6S9 549 aa10.8□□□□□ -0.68
LINC01539-201ENST00000587904 FRMPD2Q68DX3 1309 aaPredicted RBP10.79□□□□□ -0.68
LINC01539-201ENST00000587904 SMCO2A6NFE2 343 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 ACTN4O43707 911 aaKnown RBP10.79□□□□□ -0.68
LINC01539-201ENST00000587904 MYO1BO43795 1136 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 TXLNAP40222 546 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 ZNF75DP51815 510 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 EIF6P56537 245 aaKnown RBP10.79□□□□□ -0.68
LINC01539-201ENST00000587904 MDM2Q00987 491 aaPredicted RBP10.79□□□□□ -0.68
LINC01539-201ENST00000587904 GRIK3Q13003 919 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 ABCB5Q2M3G0 1257 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 RASGRP2Q7LDG7 609 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 GMCL1P1Q8NEA9 526 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 FAM151AQ8WW52 585 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 SYMPKQ92797 1274 aaKnown RBP10.79□□□□□ -0.68
LINC01539-201ENST00000587904 MTMR8Q96EF0 704 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 CSRNP1Q96S65 589 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 SRRTQ9BXP5 876 aaKnown RBP10.79□□□□□ -0.68
LINC01539-201ENST00000587904 DACH1Q9UI36 760 aa10.79□□□□□ -0.68
LINC01539-201ENST00000587904 PSDA5PKW4 1024 aaPredicted RBP10.78□□□□□ -0.68
LINC01539-201ENST00000587904 VWA3AA6NCI4 1184 aa10.78□□□□□ -0.68
LINC01539-201ENST00000587904 WNT7AO00755 349 aa10.78□□□□□ -0.68
LINC01539-201ENST00000587904 RAD17O75943 681 aa10.78□□□□□ -0.68
LINC01539-201ENST00000587904 TBC1D8O95759 1140 aa10.78□□□□□ -0.68
LINC01539-201ENST00000587904 MCM7P33993 719 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms