RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 HIBADHP31937 336 aaKnown RBP18.79■□□□□ 0.6
CIRBP-212ENST00000587169 SECISBP2LQ93073 1101 aaKnown RBP18.79■□□□□ 0.6
CIRBP-212ENST00000587169 TSPYL1Q9H0U9 437 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 ATP8A2Q9NTI2 1148 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 SAP30BPQ9UHR5 308 aaKnown RBP18.79■□□□□ 0.6
CIRBP-212ENST00000587169 FLT1P17948 1338 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 EIF3CLB5ME19 914 aaKnown RBP18.79■□□□□ 0.6
CIRBP-212ENST00000587169 AARSP49588 968 aaKnown RBP eCLIP18.79■□□□□ 0.6
CIRBP-212ENST00000587169 SMARCC1Q92922 1105 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-212ENST00000587169 EIF3CQ99613 913 aaKnown RBP18.79■□□□□ 0.6
CIRBP-212ENST00000587169 CCSER1Q9C0I3 900 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 SEMA6BQ9H3T3 888 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 STXBP3O00186 592 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 DIXDC1Q155Q3 683 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 TBC1D9BQ66K14 1250 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 NFRKBQ6P4R8 1299 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 SND1Q7KZF4 910 aaKnown RBP eCLIP18.79■□□□□ 0.6
CIRBP-212ENST00000587169 CREG2Q8IUH2 290 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 CCDC155Q8N6L0 562 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 KIAA0895Q8NCT3 520 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 ARHGAP20Q9P2F6 1191 aa18.79■□□□□ 0.6
CIRBP-212ENST00000587169 DNA2P51530 1060 aa18.78■□□□□ 0.6
CIRBP-212ENST00000587169 GRIK5Q16478 980 aa18.78■□□□□ 0.6
CIRBP-212ENST00000587169 MAP9Q49MG5 647 aa18.78■□□□□ 0.6
CIRBP-212ENST00000587169 DNAJC21Q5F1R6 531 aaKnown RBP18.78■□□□□ 0.6
CIRBP-212ENST00000587169 DHTKD1Q96HY7 919 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-212ENST00000587169 MMRN2Q9H8L6 949 aa18.78■□□□□ 0.6
CIRBP-212ENST00000587169 POLD4Q9HCU8 107 aa18.78■□□□□ 0.6
CIRBP-212ENST00000587169 ARPP21Q9UBL0 812 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-212ENST00000587169 CKAP4Q07065 602 aaKnown RBP18.78■□□□□ 0.6
CIRBP-212ENST00000587169 DYMQ7RTS9 669 aa18.78■□□□□ 0.6
CIRBP-212ENST00000587169 DZIP1Q86YF9 867 aaKnown RBP18.78■□□□□ 0.6
CIRBP-212ENST00000587169 SH3RF3Q8TEJ3 882 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-212ENST00000587169 ZPR1O75312 459 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 VAV2P52735 878 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 SPA17Q15506 151 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 VIPAS39Q9H9C1 493 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 TCP11L1Q9NUJ3 509 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 SALL4Q9UJQ4 1053 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 RPS6KA5O75582 802 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 TSPY3P0CV98 308 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 TSPY8P0CW00 308 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 EIF4A3P38919 411 aaKnown RBP18.77■□□□□ 0.6
CIRBP-212ENST00000587169 GLIS3Q8NEA6 775 aa18.77■□□□□ 0.6
CIRBP-212ENST00000587169 IFIH1Q9BYX4 1025 aaKnown RBP18.77■□□□□ 0.6
CIRBP-212ENST00000587169 GRM4Q14833 912 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 EHBP1Q8NDI1 1231 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 UIMC1Q96RL1 719 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 BARHL2Q9NY43 387 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 TXKP42681 527 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 NAPAP54920 295 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 RPS8P62241 208 aaKnown RBP18.76■□□□□ 0.59
CIRBP-212ENST00000587169 C12orf60Q5U649 245 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 TMC4Q7Z404 712 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 PLCD3Q8N3E9 789 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 TMEM47Q9BQJ4 181 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 SNX12Q9UMY4 172 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 PCDHA13Q9Y5I0 950 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 TARSL2A2RTX5 802 aaKnown RBP18.76■□□□□ 0.59
CIRBP-212ENST00000587169 OR52Z1P0C646 297 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 SF3B3Q15393 1217 aaKnown RBP18.76■□□□□ 0.59
CIRBP-212ENST00000587169 USP17L2Q6R6M4 530 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 CCDC170Q8IYT3 715 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 TGFBRAP1Q8WUH2 860 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 PURBQ96QR8 312 aaKnown RBP18.76■□□□□ 0.59
CIRBP-212ENST00000587169 MMTAG2Q9BU76 263 aaKnown RBP18.76■□□□□ 0.59
CIRBP-212ENST00000587169 TMEM260Q9NX78 707 aa18.76■□□□□ 0.59
CIRBP-212ENST00000587169 MYH14Q7Z406 1995 aaKnown RBP18.76■□□□□ 0.59
CIRBP-212ENST00000587169 GOLGA6BA6NDN3 693 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 KLRF2D3W0D1 207 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 GNPATO15228 680 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 LRRC41Q15345 812 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 KCTD19Q17RG1 926 aaPredicted RBP18.75■□□□□ 0.59
CIRBP-212ENST00000587169 SBK1Q52WX2 424 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 RRAGAQ7L523 313 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 NUP58Q9BVL2 599 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 DEF6Q9H4E7 631 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 SH3GLB2Q9NR46 395 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 BIN2Q9UBW5 565 aaPredicted RBP18.75■□□□□ 0.59
CIRBP-212ENST00000587169 SPATA31A1Q5TZJ5 1347 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 BUB1O43683 1085 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 KIF11P52732 1056 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 DGKHQ86XP1 1220 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 MS4A14Q96JA4 679 aa18.75■□□□□ 0.59
CIRBP-212ENST00000587169 AKR1B10O60218 316 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 MAPKAPK5Q8IW41 473 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 SPATA4Q8NEY3 305 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 BICDL2A1A5D9 508 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 SMCO2A6NFE2 343 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 UBA5Q9GZZ9 404 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 MKRN1Q9UHC7 482 aaKnown RBP18.74■□□□□ 0.59
CIRBP-212ENST00000587169 ZNF652Q9Y2D9 606 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 ABCA3Q99758 1704 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 GOLGA6CA6NDK9 693 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 GOLGA6DP0CG33 693 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 MCM3P25205 808 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 PACS2Q86VP3 889 aa18.74■□□□□ 0.59
CIRBP-212ENST00000587169 ZNF444Q8N0Y2 327 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-212ENST00000587169 TSEN2Q8NCE0 465 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms