RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 SDSP20132 328 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 CYP7A1P22680 504 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 SEC13P55735 322 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 GSTO1P78417 241 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 FSTL1Q12841 308 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 PRAMEF18Q5VWM3 479 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 CST9Q5W186 159 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 CDC37L1Q7L3B6 337 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 TICAM2Q86XR7 235 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 OSBP2Q969R2 916 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 ZIC5Q96T25 663 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 SEC62Q99442 399 aaKnown RBP6.79□□□□□ -1.32
CDH8-213ENST00000584966 PRDM6Q9NQX0 595 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 AATFQ9NY61 560 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDH8-213ENST00000584966 PCDHGA11Q9Y5H2 935 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 TCP10L2B9ZVM9 353 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 M0R2C6 588 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 FOXP2O15409 715 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 PRKAB2O43741 272 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 SERPINB4P48594 390 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 RGS3P49796 1198 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 RASA3Q14644 834 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 OCLNQ16625 522 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 NBPF12Q5TAG4 269 aaPredicted RBP6.78□□□□□ -1.32
CDH8-213ENST00000584966 KRT26Q7Z3Y9 468 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 FAM83AQ86UY5 434 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 APOBEC3FQ8IUX4 373 aaKnown RBP6.78□□□□□ -1.32
CDH8-213ENST00000584966 LCORLQ8N3X6 602 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 MIGA1Q8NAN2 632 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 SMC1BQ8NDV3 1235 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 FAM151AQ8WW52 585 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 DCPSQ96C86 337 aaKnown RBP6.78□□□□□ -1.32
CDH8-213ENST00000584966 STRBPQ96SI9 672 aaKnown RBP6.78□□□□□ -1.32
CDH8-213ENST00000584966 TMEM39BQ9GZU3 492 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 DEFB129Q9H1M3 183 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 IL25Q9H293 177 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 ATRNL1Q5VV63 1379 aa6.78□□□□□ -1.32
CDH8-213ENST00000584966 GREB1LQ9C091 1923 aaPredicted RBP6.78□□□□□ -1.32
CDH8-213ENST00000584966 DOCK1Q14185 1865 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 A0A0D9SFI3 127 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 DDTLA6NHG4 134 aaPredicted RBP6.77□□□□□ -1.33
CDH8-213ENST00000584966 ADARB2-AS1A8MUL3 147 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 EFSO43281 561 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 MYO1BO43795 1136 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 SIN3BO75182 1162 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 ENTPD3O75355 529 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 BAG3O95817 575 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 ZFYP08048 801 aaPredicted RBP6.77□□□□□ -1.33
CDH8-213ENST00000584966 C1QTNF8P60827 252 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 ZSCAN25Q6NSZ9 544 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 SHISA2Q6UWI4 295 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 DNAJC14Q6Y2X3 702 aaPredicted RBP6.77□□□□□ -1.33
CDH8-213ENST00000584966 TPCN2Q8NHX9 752 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 TGFBRAP1Q8WUH2 860 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 APPBP2Q92624 585 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 RILPL2Q969X0 211 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 CDCA5Q96FF9 252 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 FAM227BQ96M60 508 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 FSD1Q9BTV5 496 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDH8-213ENST00000584966 ARMT1Q9H993 441 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 VEZTQ9HBM0 779 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 CXXC1Q9P0U4 656 aaPredicted RBP6.77□□□□□ -1.33
CDH8-213ENST00000584966 RNF112Q9ULX5 631 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 RPAP1Q9BWH6 1393 aaPredicted RBP6.77□□□□□ -1.33
CDH8-213ENST00000584966 MYH4Q9Y623 1939 aa6.77□□□□□ -1.33
CDH8-213ENST00000584966 COL2A1P02458 1487 aaPredicted RBP6.77□□□□□ -1.33
CDH8-213ENST00000584966 FLT1P17948 1338 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 GSG1L2A8MUP6 293 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 SMIM22K7EJ46 135 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
CDH8-213ENST00000584966 MBD4O95243 580 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 CHMLP26374 656 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 SCNN1AP37088 669 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 TCP10Q12799 353 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 USP4Q13107 963 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 NMIQ13287 307 aaPredicted RBP6.76□□□□□ -1.33
CDH8-213ENST00000584966 LAMC2Q13753 1193 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 BMP2KLQ5H9B9 411 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 CCDC129Q6ZRS4 1044 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 ZNF589Q86UQ0 364 aaPredicted RBP6.76□□□□□ -1.33
CDH8-213ENST00000584966 METTL16Q86W50 562 aaKnown RBP6.76□□□□□ -1.33
CDH8-213ENST00000584966 TEX11Q8IYF3 940 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 OSBPL5Q9H0X9 879 aaPredicted RBP6.76□□□□□ -1.33
CDH8-213ENST00000584966 DCP1AQ9NPI6 582 aaPredicted RBP6.76□□□□□ -1.33
CDH8-213ENST00000584966 HELLSQ9NRZ9 838 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 FZD1Q9UP38 647 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 PPP2R3BQ9Y5P8 575 aa6.76□□□□□ -1.33
CDH8-213ENST00000584966 SFI1A8K8P3 1242 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 GPAA1O43292 621 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 PRMT3O60678 531 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 NRG1Q02297 640 aaPredicted RBP6.75□□□□□ -1.33
CDH8-213ENST00000584966 PICALMQ13492 652 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 TNFAIP1Q13829 316 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 RRP1BQ14684 758 aaKnown RBP6.75□□□□□ -1.33
CDH8-213ENST00000584966 MAP3K11Q16584 847 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 MCMDC2Q4G0Z9 681 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 SAMD5Q5TGI4 173 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 VPS53Q5VIR6 699 aa6.75□□□□□ -1.33
CDH8-213ENST00000584966 MOB2Q70IA6 237 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms