RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 PAK6Q9NQU5 681 aaPredicted RBP15.98■□□□□ 0.15
TRAF4-215ENST00000584944 SZT2Q5T011 3432 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 CNTNAP5Q8WYK1 1306 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 CFBP00751 764 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 PGK2P07205 417 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 IFNAR1P17181 557 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 GRB14Q14449 540 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 ME3Q16798 604 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 NECAB1Q8N987 351 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 GTF3C6Q969F1 213 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 MTMR8Q96EF0 704 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 DEFB118Q96PH6 123 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 RNF26Q9BY78 433 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-215ENST00000584944 ADD3Q9UEY8 706 aaKnown RBP15.97■□□□□ 0.15
TRAF4-215ENST00000584944 GJD2Q9UKL4 321 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 NID2Q14112 1375 aa15.97■□□□□ 0.15
TRAF4-215ENST00000584944 RLFQ13129 1914 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 PRPF3O43395 683 aaKnown RBP15.96■□□□□ 0.15
TRAF4-215ENST00000584944 PPFIA3O75145 1194 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 TFRCP02786 760 aaKnown RBP15.96■□□□□ 0.15
TRAF4-215ENST00000584944 SCG2P13521 617 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 SCRN1Q12765 414 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 MUM1L1Q5H9M0 696 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 MORN1Q5T089 497 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 MFSD14CQ5VZR4 134 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 SMARCC2Q8TAQ2 1214 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.15
TRAF4-215ENST00000584944 CRISPLD2Q9H0B8 497 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 PRO3102Q9H379 93 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 FAM217BQ9NTX9 383 aaPredicted RBP15.96■□□□□ 0.15
TRAF4-215ENST00000584944 KIF3AQ9Y496 699 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 NR2E3Q9Y5X4 410 aa15.96■□□□□ 0.15
TRAF4-215ENST00000584944 COL11A1P12107 1806 aaPredicted RBP15.96■□□□□ 0.14
TRAF4-215ENST00000584944 PARP14Q460N5 1801 aa15.96■□□□□ 0.14
TRAF4-215ENST00000584944 GCOM1H8Y6P7 765 aaPredicted RBP15.95■□□□□ 0.14
TRAF4-215ENST00000584944 NFIBO00712 420 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 DEXIO95424 95 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 HSP90AA1P07900 732 aaKnown RBP15.95■□□□□ 0.14
TRAF4-215ENST00000584944 POLR2MP0CAP2 368 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 XRCC5P13010 732 aaKnown RBP15.95■□□□□ 0.14
TRAF4-215ENST00000584944 TAL1P17542 331 aaPredicted RBP15.95■□□□□ 0.14
TRAF4-215ENST00000584944 BAATQ14032 418 aaPredicted RBP15.95■□□□□ 0.14
TRAF4-215ENST00000584944 TRIM29Q14134 588 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 CCDC83Q8IWF9 413 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 HSCBQ8IWL3 235 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 CCDC148Q8NFR7 591 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 MAF1Q9H063 256 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 GLT8D2Q9H1C3 349 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 PSTPIP2Q9H939 334 aa15.95■□□□□ 0.14
TRAF4-215ENST00000584944 A1CFQ9NQ94 594 aaKnown RBP15.95■□□□□ 0.14
TRAF4-215ENST00000584944 HMGCRP04035 888 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 ADCY7P51828 1080 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 PFKFB3Q16875 520 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-215ENST00000584944 PPP1R18Q6NYC8 613 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 RGS22Q8NE09 1264 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.94■□□□□ 0.142e-6■■■□□ 15.1
TRAF4-215ENST00000584944 EHMT1Q9H9B1 1298 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 C6orf50Q9HD87 102 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 MAP3K20Q9NYL2 800 aaKnown RBP15.94■□□□□ 0.14
TRAF4-215ENST00000584944 CYP39A1Q9NYL5 469 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 CNPY2Q9Y2B0 182 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 PLXNB2O15031 1838 aa15.94■□□□□ 0.14
TRAF4-215ENST00000584944 PPP1R11O60927 126 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-215ENST00000584944 RPS6P62753 249 aaKnown RBP15.93■□□□□ 0.14
TRAF4-215ENST00000584944 FUT2Q10981 343 aa15.93■□□□□ 0.14
TRAF4-215ENST00000584944 SLC35G1Q2M3R5 365 aa15.93■□□□□ 0.14
TRAF4-215ENST00000584944 WWC2Q6AWC2 1192 aa15.93■□□□□ 0.14
TRAF4-215ENST00000584944 SAMD3Q8N6K7 520 aa15.93■□□□□ 0.14
TRAF4-215ENST00000584944 BICD2Q8TD16 824 aa15.93■□□□□ 0.14
TRAF4-215ENST00000584944 LLPHQ9BRT6 129 aaKnown RBP15.93■□□□□ 0.14
TRAF4-215ENST00000584944 BARHL2Q9NY43 387 aa15.93■□□□□ 0.14
TRAF4-215ENST00000584944 ORC3Q9UBD5 711 aaPredicted RBP15.93■□□□□ 0.14
TRAF4-215ENST00000584944 SMCO2A6NFE2 343 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 ASB14A6NK59 587 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 SPDYE3A6NKU9 549 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 LARGE1O95461 756 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 GNA11P29992 359 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 HOXA13P31271 388 aaPredicted RBP15.92■□□□□ 0.14
TRAF4-215ENST00000584944 NLRP5P59047 1200 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 HMGN5P82970 282 aaKnown RBP15.92■□□□□ 0.14
TRAF4-215ENST00000584944 TRIM32Q13049 653 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 NTRK3Q16288 839 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 ARHGEF16Q5VV41 709 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 SLC30A10Q6XR72 485 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 FCHSD1Q86WN1 690 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 CLEC4DQ8WXI8 215 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 PAWRQ96IZ0 340 aaKnown RBP15.92■□□□□ 0.14
TRAF4-215ENST00000584944 BRMS1Q9HCU9 246 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 DIS3Q9Y2L1 958 aaKnown RBP15.92■□□□□ 0.14
TRAF4-215ENST00000584944 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.92■□□□□ 0.14
TRAF4-215ENST00000584944 RPTORQ8N122 1335 aa15.92■□□□□ 0.14
TRAF4-215ENST00000584944 EVI5O60447 810 aa15.91■□□□□ 0.14
TRAF4-215ENST00000584944 COBLO75128 1261 aa15.91■□□□□ 0.14
TRAF4-215ENST00000584944 HOXC6P09630 235 aa15.91■□□□□ 0.14
TRAF4-215ENST00000584944 CNTN2Q02246 1040 aa15.91■□□□□ 0.14
TRAF4-215ENST00000584944 PDE4DQ08499 809 aa15.91■□□□□ 0.14
TRAF4-215ENST00000584944 OLFML2BQ68BL8 750 aa15.91■□□□□ 0.14
TRAF4-215ENST00000584944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRAF4-215ENST00000584944 NSUN6Q8TEA1 469 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms