RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 NSMFQ6X4W1 530 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 FAM178BQ8IXR5 827 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 ZBED2Q9BTP6 218 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 POLR3EQ9NVU0 708 aa16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 TRIP12Q14669 1992 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-224ENST00000584672 RFC2P35250 354 aa16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 NHLH1Q02575 133 aa16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 UBE3CQ15386 1083 aa16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 MTG1Q9BT17 334 aaPredicted RBP16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 VTA1Q9NP79 307 aa16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 GPHNQ9NQX3 736 aaPredicted RBP16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 Q9Y3F1 56 aa16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 SCN10AQ9Y5Y9 1956 aa16.86■□□□□ 0.29
CSNK1D-224ENST00000584672 STAT2P52630 851 aa16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 DEFB103AP81534 67 aa16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 RASGRP2Q7LDG7 609 aa16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 OR6J1Q8NGC5 347 aa16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 WDR11Q9BZH6 1224 aa16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 CYP39A1Q9NYL5 469 aa16.85■□□□□ 0.29
CSNK1D-224ENST00000584672 GSG1L2A8MUP6 293 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 TTLL1O95922 423 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 CPT1AP50416 773 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 WDR5P61964 334 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 SBK1Q52WX2 424 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 FAM117BQ6P1L5 589 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 KCTD1Q719H9 257 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 ZNF444Q8N0Y2 327 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 GMCL1P1Q8NEA9 526 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 MKL1Q969V6 931 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 SNX27Q96L92 541 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 FBXL18Q96ME1 805 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 STRBPQ96SI9 672 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 HAUS7Q99871 368 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 SUGCTQ9HAC7 445 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 MTMR7Q9Y216 660 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 NOD1Q9Y239 953 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 SIP14410 1827 aa16.84■□□□□ 0.29
CSNK1D-224ENST00000584672 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
CSNK1D-224ENST00000584672 ATP5JP18859 108 aa16.83■□□□□ 0.28
CSNK1D-224ENST00000584672 TKFCQ3LXA3 575 aa16.83■□□□□ 0.28
CSNK1D-224ENST00000584672 PTCRAQ6ISU1 281 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-224ENST00000584672 ANKS1AQ92625 1134 aa16.83■□□□□ 0.28
CSNK1D-224ENST00000584672 EPB41L4AQ9HCS5 686 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-224ENST00000584672 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 BAIAP3O94812 1187 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 FDX1P10109 184 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 MCCP23508 829 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 TDO2P48775 406 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 BFSP2Q13515 415 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 LEXMQ3ZCV2 418 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 RPAP2Q8IXW5 612 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 PANK1Q8TE04 598 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 CHURC1Q8WUH1 139 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 STAG1Q8WVM7 1258 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 COPS5Q92905 334 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 CRBNQ96SW2 442 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 CCPG1Q9ULG6 757 aa16.82■□□□□ 0.28
CSNK1D-224ENST00000584672 LINC01553A4QN01 128 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 H3BQ06 376 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 ALADP13716 330 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 SLC1A4P43007 532 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 ALDH5A1P51649 535 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 BAATQ14032 418 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 TCTN1Q2MV58 587 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 ZSCAN25Q6NSZ9 544 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 TGS1Q96RS0 853 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 LMCD1Q9NZU5 365 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 WDFY4Q6ZS81 3184 aa16.81■□□□□ 0.28
CSNK1D-224ENST00000584672 APPP05067 770 aa16.8■□□□□ 0.28
CSNK1D-224ENST00000584672 PTGISQ16647 500 aa16.8■□□□□ 0.28
CSNK1D-224ENST00000584672 EP400NLQ6ZTU2 488 aa16.8■□□□□ 0.28
CSNK1D-224ENST00000584672 MORC4Q8TE76 937 aa16.8■□□□□ 0.28
CSNK1D-224ENST00000584672 PRR12Q9ULL5 1215 aa16.8■□□□□ 0.28
CSNK1D-224ENST00000584672 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 NFIBO00712 420 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 DCXO43602 365 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 ERVK-21P61565 698 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 GPNMBQ14956 572 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 PPP2R5BQ15173 497 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 NFRKBQ6P4R8 1299 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 OSBP2Q969R2 916 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 C17orf80Q9BSJ5 609 aa16.79■□□□□ 0.28
CSNK1D-224ENST00000584672 GRXCR2A6NFK2 248 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 GJB5O95377 273 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 CALML3P27482 149 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 TFAP4Q01664 338 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 BRDTQ58F21 947 aaPredicted RBP16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 SLC30A10Q6XR72 485 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 NEDD1Q8NHV4 660 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 GMCL1Q96IK5 515 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 PHOX2BQ99453 314 aa16.78■□□□□ 0.28
CSNK1D-224ENST00000584672 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms