RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 IVNS1ABPQ9Y6Y0 642 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 GCOM1H8Y6P7 765 aaPredicted RBP13.37□□□□□ -0.27
CDRT1-207ENST00000583965 STX6O43752 255 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 CFBP00751 764 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 POLR2MP0CAP2 368 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 FCER1AP12319 257 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 TAL1P17542 331 aaPredicted RBP13.37□□□□□ -0.27
CDRT1-207ENST00000583965 KRT2P35908 639 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 SP3Q02447 781 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 KIF22Q14807 665 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 NPY5RQ15761 445 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 RNF207Q6ZRF8 634 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 PLEKHH3Q7Z736 793 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 BLIDQ8IZY5 108 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 EFCC1Q9HA90 598 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
CDRT1-207ENST00000583965 GJB4Q9NTQ9 266 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 KCNJ14Q9UNX9 436 aa13.37□□□□□ -0.27
CDRT1-207ENST00000583965 GPR25O00155 361 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 MEIS2O14770 477 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 FOSP01100 380 aaPredicted RBP13.36□□□□□ -0.27
CDRT1-207ENST00000583965 DDIT3P35638 169 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 CLK2P49760 499 aaKnown RBP13.36□□□□□ -0.27
CDRT1-207ENST00000583965 FOSBP53539 338 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 LACTBP83111 547 aaPredicted RBP13.36□□□□□ -0.27
CDRT1-207ENST00000583965 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 KCTD2Q14681 263 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 WDR78Q5VTH9 848 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 NSMFQ6X4W1 530 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 GPR142Q7Z601 462 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
CDRT1-207ENST00000583965 ANKRD35Q8N283 1001 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 MMP19Q99542 508 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 FOXP1Q9H334 677 aaPredicted RBP13.36□□□□□ -0.27
CDRT1-207ENST00000583965 CYP39A1Q9NYL5 469 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 LRRC37A2A6NM11 1700 aa13.36□□□□□ -0.27
CDRT1-207ENST00000583965 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
CDRT1-207ENST00000583965 SLC15A5A6NIM6 579 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 M0R2N6 131 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 FKTNO75072 461 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 PTPREP23469 700 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 FCGRTP55899 365 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 RPS6P62753 249 aaKnown RBP13.35□□□□□ -0.27
CDRT1-207ENST00000583965 GUCY1B3Q02153 619 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 BAATQ14032 418 aaPredicted RBP13.35□□□□□ -0.27
CDRT1-207ENST00000583965 GRB14Q14449 540 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 ARHGEF6Q15052 776 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 DIS3L2Q8IYB7 885 aaKnown RBP13.35□□□□□ -0.27
CDRT1-207ENST00000583965 EHMT1Q9H9B1 1298 aa13.35□□□□□ -0.27
CDRT1-207ENST00000583965 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
CDRT1-207ENST00000583965 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 LOC102724159A0A0B4J2E5 919 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 TNPO2O14787 897 aaKnown RBP13.34□□□□□ -0.27
CDRT1-207ENST00000583965 GNRH1P01148 92 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 U2AF2P26368 475 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDRT1-207ENST00000583965 PSMC4P43686 418 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 NUCB2P80303 420 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
CDRT1-207ENST00000583965 PWP2Q15269 919 aaKnown RBP13.34□□□□□ -0.27
CDRT1-207ENST00000583965 UBE2SQ16763 222 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 USP17L6PQ6QN14 398 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 KRT25Q7Z3Z0 450 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 DNERQ8NFT8 737 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 SYTL5Q8TDW5 730 aaPredicted RBP13.34□□□□□ -0.27
CDRT1-207ENST00000583965 SOCS4Q8WXH5 440 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 TBC1D5Q92609 795 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 ERO1AQ96HE7 468 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 SLC5A4Q9NY91 659 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 BIN2Q9UBW5 565 aaPredicted RBP13.34□□□□□ -0.27
CDRT1-207ENST00000583965 PCDHA6Q9UN73 950 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 MTMR6Q9Y217 621 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 PCDHA8Q9Y5H6 950 aa13.34□□□□□ -0.27
CDRT1-207ENST00000583965 BTBD18B2RXH4 712 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 POTEB2H3BUK9 544 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 ADORA2AP29274 412 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 HOXA13P31271 388 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-207ENST00000583965 MORN1Q5T089 497 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 MCTP1Q6DN14 999 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 BRAPQ7Z569 592 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 NOSTRINQ8IVI9 506 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 FAM133AQ8N9E0 248 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 TNFRSF25Q93038 417 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 ZSCAN16Q9H4T2 348 aaPredicted RBP13.33□□□□□ -0.28
CDRT1-207ENST00000583965 ADD3Q9UEY8 706 aaKnown RBP13.33□□□□□ -0.28
CDRT1-207ENST00000583965 DIS3Q9Y2L1 958 aaKnown RBP13.33□□□□□ -0.28
CDRT1-207ENST00000583965 FRMPD4Q14CM0 1322 aa13.33□□□□□ -0.28
CDRT1-207ENST00000583965 CCDC194A0A1B0GVG4 234 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 B4DLN1 442 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 BRD1O95696 1058 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 ZSCAN22P10073 491 aaPredicted RBP13.32□□□□□ -0.28
CDRT1-207ENST00000583965 HOXD10P28358 340 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 MAP2K5Q13163 448 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 NR5A1Q13285 461 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 NONOQ15233 471 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDRT1-207ENST00000583965 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
CDRT1-207ENST00000583965 FCHSD1Q86WN1 690 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms