RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 NUP88Q99567 741 aaPredicted RBP18.03■□□□□ 0.48
SPECC1-220ENST00000583463 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
SPECC1-220ENST00000583463 TANGO6Q9C0B7 1094 aa18.03■□□□□ 0.48
SPECC1-220ENST00000583463 ISY1Q9ULR0 285 aaKnown RBP18.03■□□□□ 0.48
SPECC1-220ENST00000583463 FRMPD2Q68DX3 1309 aaPredicted RBP18.02■□□□□ 0.48
SPECC1-220ENST00000583463 CLTBP09497 229 aa18.02■□□□□ 0.48
SPECC1-220ENST00000583463 RXRAP19793 462 aa18.02■□□□□ 0.48
SPECC1-220ENST00000583463 DNAJB2P25686 324 aa18.02■□□□□ 0.48
SPECC1-220ENST00000583463 RTN1Q16799 776 aa18.02■□□□□ 0.48
SPECC1-220ENST00000583463 NCAPG2Q86XI2 1143 aa18.02■□□□□ 0.48
SPECC1-220ENST00000583463 FANCBQ8NB91 859 aa18.02■□□□□ 0.48
SPECC1-220ENST00000583463 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.48
SPECC1-220ENST00000583463 ZSCAN31Q96LW9 406 aaPredicted RBP18.02■□□□□ 0.48
SPECC1-220ENST00000583463 RBM28Q9NW13 759 aaKnown RBP18.02■□□□□ 0.48
SPECC1-220ENST00000583463 PHF24Q9UPV7 400 aa18.02■□□□□ 0.48
SPECC1-220ENST00000583463 PALM3A6NDB9 673 aaPredicted RBP18.01■□□□□ 0.47
SPECC1-220ENST00000583463 COG2Q14746 738 aa18.01■□□□□ 0.47
SPECC1-220ENST00000583463 PPP2R5BQ15173 497 aa18.01■□□□□ 0.47
SPECC1-220ENST00000583463 KCTD1Q719H9 257 aa18.01■□□□□ 0.47
SPECC1-220ENST00000583463 CCDC144CPQ8IYA2 1237 aa18.01■□□□□ 0.47
SPECC1-220ENST00000583463 SLKQ9H2G2 1235 aaPredicted RBP18.01■□□□□ 0.47
SPECC1-220ENST00000583463 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
SPECC1-220ENST00000583463 MAD2L2Q9UI95 211 aa18.01■□□□□ 0.47
SPECC1-220ENST00000583463 FEM1BQ9UK73 627 aa18.01■□□□□ 0.47
SPECC1-220ENST00000583463 REV3LO60673 3130 aa18.01■□□□□ 0.47
SPECC1-220ENST00000583463 CCDC196A0A1B0GTZ2 297 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 A0A1W2PQ45 241 aaPredicted RBP18■□□□□ 0.47
SPECC1-220ENST00000583463 A0A1W2PQY0 241 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 TNFRSF10AO00220 468 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 KIAA0355O15063 1070 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 PFKFB2O60825 505 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 LARGE1O95461 756 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 GOLGA8HP0CJ92 632 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 GNAQP50148 359 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 STAT2P52630 851 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 FAAP100Q0VG06 881 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 STK3Q13188 491 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 ME3Q16798 604 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 TJAP1Q5JTD0 557 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 C16orf59Q7L2K0 433 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 FAM160B2Q86V87 743 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 SNX21Q969T3 373 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 ZNF576Q9H609 170 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 GPCPD1Q9NPB8 672 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 XPNPEP3Q9NQH7 507 aa18■□□□□ 0.47
SPECC1-220ENST00000583463 MYADML2A6NDP7 307 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 TMEM232C9JQI7 657 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 PLA2G6O60733 806 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 FLOT1O75955 427 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 RAG1P15918 1043 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 DSG3P32926 999 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 IKQ13123 557 aaPredicted RBP17.99■□□□□ 0.47
SPECC1-220ENST00000583463 TMEM132BQ14DG7 1078 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 C1orf53Q5VUE5 145 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 BTNL9Q6UXG8 535 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 TMTC3Q6ZXV5 915 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 STAG2Q8N3U4 1231 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 CHURC1Q8WUH1 139 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 GTF3C6Q969F1 213 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 SLF1Q9BQI6 1058 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.47
SPECC1-220ENST00000583463 LZTS2Q9BRK4 669 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 FBXO28Q9NVF7 368 aa17.99■□□□□ 0.47
SPECC1-220ENST00000583463 KLRF2D3W0D1 207 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 STRNO43815 780 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 CDC27P30260 824 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 CCT2P78371 535 aaKnown RBP17.98■□□□□ 0.47
SPECC1-220ENST00000583463 FPGSQ05932 587 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 ADGRE1Q14246 886 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 CCDC85BQ15834 202 aaPredicted RBP17.98■□□□□ 0.47
SPECC1-220ENST00000583463 HSCBQ8IWL3 235 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 SHCBP1Q8NEM2 672 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 SYMPKQ92797 1274 aaKnown RBP17.98■□□□□ 0.47
SPECC1-220ENST00000583463 PRDM12Q9H4Q4 367 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 NCOA5Q9HCD5 579 aaKnown RBP17.98■□□□□ 0.47
SPECC1-220ENST00000583463 FAM217BQ9NTX9 383 aaPredicted RBP17.98■□□□□ 0.47
SPECC1-220ENST00000583463 TMEM39AQ9NV64 488 aa17.98■□□□□ 0.47
SPECC1-220ENST00000583463 DHX16O60231 1041 aaKnown RBP17.97■□□□□ 0.47
SPECC1-220ENST00000583463 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
SPECC1-220ENST00000583463 ZNF865P0CJ78 1059 aaPredicted RBP17.97■□□□□ 0.47
SPECC1-220ENST00000583463 SCRN1Q12765 414 aa17.97■□□□□ 0.47
SPECC1-220ENST00000583463 SYDE2Q5VT97 1194 aa17.97■□□□□ 0.47
SPECC1-220ENST00000583463 TTBK2Q6IQ55 1244 aa17.97■□□□□ 0.47
SPECC1-220ENST00000583463 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
SPECC1-220ENST00000583463 NECAB3Q96P71 396 aaPredicted RBP17.97■□□□□ 0.47
SPECC1-220ENST00000583463 SPZ1Q9BXG8 430 aa17.97■□□□□ 0.47
SPECC1-220ENST00000583463 PPP1R9AQ9ULJ8 1098 aa17.97■□□□□ 0.47
SPECC1-220ENST00000583463 K7ELQ4 463 aaPredicted RBP17.96■□□□□ 0.47
SPECC1-220ENST00000583463 CPLX1O14810 134 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 ADAMTS4O75173 837 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 ACRP10323 421 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 SMARCA1P28370 1054 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 SLC16A2P36021 539 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 CPLX2Q6PUV4 134 aaKnown RBP17.96■□□□□ 0.47
SPECC1-220ENST00000583463 NECAB1Q8N987 351 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 PRPF38AQ8NAV1 312 aaKnown RBP17.96■□□□□ 0.47
SPECC1-220ENST00000583463 TIFAQ96CG3 184 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 PBX4Q9BYU1 374 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 TSHZ2Q9NRE2 1034 aa17.96■□□□□ 0.47
SPECC1-220ENST00000583463 HOXC10Q9NYD6 342 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms