RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 GNASQ5JWF2 1037 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 KIAA1755Q5JYT7 1200 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 NECAB2Q7Z6G3 386 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 SLC17A8Q8NDX2 589 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 C1orf216Q8TAB5 229 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 COA7Q96BR5 231 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 MKNK1Q9BUB5 465 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 C2orf49Q9BVC5 232 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 NIFKQ9BYG3 293 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 ANTXR1Q9H6X2 564 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 MTMR10Q9NXD2 777 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 RAI14Q9P0K7 980 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 ZBTB21Q9ULJ3 1066 aa9.68□□□□□ -0.86
PPP4R1-225ENST00000583438 RLBP1P12271 317 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 ZAP70P43403 619 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 GCLCP48506 637 aaPredicted RBP9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 ERVK-24P63145 666 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 TNNI3KQ59H18 835 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 STAG2Q8N3U4 1231 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 TMEM57Q8N5G2 664 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 ACER1Q8TDN7 264 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 GUCD1Q96NT3 240 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 API5Q9BZZ5 524 aaKnown RBP9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 C11orf49Q9H6J7 331 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 BTBD7Q9P203 1132 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 DBNLQ9UJU6 430 aaKnown RBP9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 FPGT-TNNI3KV9GXZ4 949 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 MUC3AQ02505 3323 aa9.67□□□□□ -0.86
PPP4R1-225ENST00000583438 LCTP09848 1927 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 SERTM1A2A2V5 107 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 EML1O00423 815 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 CHGBP05060 677 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 PLA2G4AP47712 749 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 ZYXQ15942 572 aaKnown RBP9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 LRIT3Q3SXY7 679 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 SPTY2D1Q68D10 685 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 B4GALNT3Q6L9W6 998 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 GPR142Q7Z601 462 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 DEFB123Q8N688 67 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 NPLOC4Q8TAT6 608 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 PAGR1Q9BTK6 254 aa9.66□□□□□ -0.86
PPP4R1-225ENST00000583438 CHD9Q3L8U1 2897 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 MAN1A2O60476 641 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 GH2P01242 217 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 SHMT1P34896 483 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 NAA16Q6N069 864 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 CLEC10AQ8IUN9 316 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 TDHQ8IZJ6 230 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 MIGA1Q8NAN2 632 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 SSH3Q8TE77 659 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 ARHGAP45Q92619 1136 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 EAF2Q96CJ1 260 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 SENP2Q9HC62 589 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 PI4KBQ9UBF8 816 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 HERC5Q9UII4 1024 aaKnown RBP9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 ZNF232Q9UNY5 417 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 AKAP2Q9Y2D5 859 aa9.65□□□□□ -0.86
PPP4R1-225ENST00000583438 LRRC37A2A6NM11 1700 aa9.65□□□□□ -0.87
PPP4R1-225ENST00000583438 MYH4Q9Y623 1939 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 A0A1W2PRG0 241 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 XRCC5P13010 732 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 TXLNAP40222 546 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 PLCD1P51178 756 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 IRX3P78415 501 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 TATDN1Q6P1N9 297 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 GPRC5AQ8NFJ5 357 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 C12orf42Q96LP6 360 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 LRP2BPQ9P2M1 347 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 SEPT3Q9UH03 358 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 HCN4Q9Y3Q4 1203 aa9.64□□□□□ -0.87
PPP4R1-225ENST00000583438 GNAI2P04899 355 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 ASNSP08243 561 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 GNAI3P08754 354 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 CT47B1P0C2W7 299 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 CYP2D6P10635 497 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 SNRPBP14678 240 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 ZKSCAN1P17029 563 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 VCAM1P19320 739 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 CYP2C19P33261 490 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 GSTO1P78417 241 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 KCNA1Q09470 495 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 WDR44Q5JSH3 913 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 C9orf50Q5SZB4 431 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 ATF7IPQ6VMQ6 1270 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 SLC44A5Q8NCS7 719 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 FAM161BQ96MY7 647 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 APBA2Q99767 749 aa9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 COL25A1Q9BXS0 654 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 CCDC8Q9H0W5 538 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-225ENST00000583438 TTC28Q96AY4 2481 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 MAP4K4O95819 1239 aaPredicted RBP9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 LDHCP07864 332 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 UQCRFS1P1P0C7P4 283 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 CYBAP13498 195 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 CYP7A1P22680 504 aa9.62□□□□□ -0.87
PPP4R1-225ENST00000583438 ITGB8P26012 769 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms