RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 PRRC2BQ5JSZ5 2229 aaKnown RBP14.6□□□□□ -0.07
TOP3A-215ENST00000583328 BDP1A6H8Y1 2624 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 PATL2C9JE40 543 aaKnown RBP14.6□□□□□ -0.07
TOP3A-215ENST00000583328 RNF113AO15541 343 aaKnown RBP14.6□□□□□ -0.07
TOP3A-215ENST00000583328 SMARCA5O60264 1052 aaPredicted RBP14.6□□□□□ -0.07
TOP3A-215ENST00000583328 RFC2P35250 354 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 FAM47CQ5HY64 1035 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 KCTD1Q719H9 257 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 IFNL3Q8IZI9 196 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 KBTBD3Q8NAB2 608 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 MTG1Q9BT17 334 aaPredicted RBP14.6□□□□□ -0.07
TOP3A-215ENST00000583328 WDR11Q9BZH6 1224 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 LRRCC1Q9C099 1032 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 ZBTB40Q9NUA8 1239 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 DDX19BQ9UMR2 479 aa14.6□□□□□ -0.07
TOP3A-215ENST00000583328 CHD9Q3L8U1 2897 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 PLA2G6O60733 806 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 SLC3A2P08195 630 aaKnown RBP14.59□□□□□ -0.07
TOP3A-215ENST00000583328 CPT1AP50416 773 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 PURAQ00577 322 aaKnown RBP14.59□□□□□ -0.07
TOP3A-215ENST00000583328 TAP1Q03518 808 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 PPP4R3BQ5MIZ7 849 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 RCSD1Q6JBY9 416 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 HERC6Q8IVU3 1022 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 OR6J1Q8NGC5 347 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 MORC4Q8TE76 937 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 PURBQ96QR8 312 aaKnown RBP14.59□□□□□ -0.07
TOP3A-215ENST00000583328 NACAP1Q9BZK3 213 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 ECHDC1Q9NTX5 307 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 CCPG1Q9ULG6 757 aa14.59□□□□□ -0.07
TOP3A-215ENST00000583328 ZFYP08048 801 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-215ENST00000583328 IQCF3P0C7M6 154 aa14.58□□□□□ -0.08
TOP3A-215ENST00000583328 GRB10Q13322 594 aa14.58□□□□□ -0.08
TOP3A-215ENST00000583328 NBPF20Q3BBV1 942 aa14.58□□□□□ -0.08
TOP3A-215ENST00000583328 BRDTQ58F21 947 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-215ENST00000583328 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
TOP3A-215ENST00000583328 ADD3Q9UEY8 706 aaKnown RBP14.58□□□□□ -0.08
TOP3A-215ENST00000583328 PRR12Q9ULL5 1215 aa14.58□□□□□ -0.08
TOP3A-215ENST00000583328 STX8Q9UNK0 236 aa14.58□□□□□ -0.08
TOP3A-215ENST00000583328 MTMR7Q9Y216 660 aa14.58□□□□□ -0.08
TOP3A-215ENST00000583328 GREB1LQ9C091 1923 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-215ENST00000583328 M0R2C6 588 aa14.57□□□□□ -0.08
TOP3A-215ENST00000583328 GPR37L1O60883 481 aa14.57□□□□□ -0.08
TOP3A-215ENST00000583328 ARHGEF15O94989 841 aa14.57□□□□□ -0.08
TOP3A-215ENST00000583328 BAATQ14032 418 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-215ENST00000583328 PPP1R13LQ8WUF5 828 aa14.57□□□□□ -0.08
TOP3A-215ENST00000583328 RCAN3Q9UKA8 241 aa14.57□□□□□ -0.08
TOP3A-215ENST00000583328 NOD1Q9Y239 953 aa14.57□□□□□ -0.08
TOP3A-215ENST00000583328 PLIN4Q96Q06 1357 aa14.57□□□□□ -0.08
TOP3A-215ENST00000583328 FAM86C2PA6NEL3 165 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 ICAM1P05362 532 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 KCNJ6P48051 423 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 ALDH5A1P51649 535 aaPredicted RBP14.56□□□□□ -0.08
TOP3A-215ENST00000583328 BFSP2Q13515 415 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 CCDC96Q2M329 555 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 LRRFIP1Q32MZ4 808 aaKnown RBP14.56□□□□□ -0.08
TOP3A-215ENST00000583328 NFRKBQ6P4R8 1299 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 GPATCH3Q96I76 525 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 NAPBQ9H115 298 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 RAD50Q92878 1312 aa14.56□□□□□ -0.08
TOP3A-215ENST00000583328 LOC102724159A0A0B4J2E5 919 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 RBM47A0AV96 593 aaKnown RBP14.55□□□□□ -0.08
TOP3A-215ENST00000583328 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 TSPY2A6NKD2 308 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 NKRFO15226 690 aaKnown RBP eCLIP14.55□□□□□ -0.08
TOP3A-215ENST00000583328 KPNA6O60684 536 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 BAIAP3O94812 1187 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 CHMP4BP1P59074 171 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 PPARAQ07869 468 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 PWP2Q15269 919 aaKnown RBP14.55□□□□□ -0.08
TOP3A-215ENST00000583328 KHSRPQ92945 711 aaKnown RBP eCLIP14.55□□□□□ -0.08
TOP3A-215ENST00000583328 ZBED2Q9BTP6 218 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 CHD7Q9P2D1 2997 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 GBF1Q92538 1859 aa14.55□□□□□ -0.08
TOP3A-215ENST00000583328 PI4K2BG5E9Z4 385 aa14.54□□□□□ -0.08
TOP3A-215ENST00000583328 LPXNO60711 386 aa14.54□□□□□ -0.08
TOP3A-215ENST00000583328 PTPN11Q06124 597 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-215ENST00000583328 PPP2R5BQ15173 497 aa14.54□□□□□ -0.08
TOP3A-215ENST00000583328 TSHZ3Q63HK5 1081 aa14.54□□□□□ -0.08
TOP3A-215ENST00000583328 SPRED2Q7Z698 418 aa14.54□□□□□ -0.08
TOP3A-215ENST00000583328 C11orf16Q9NQ32 467 aa14.54□□□□□ -0.08
TOP3A-215ENST00000583328 LMCD1Q9NZU5 365 aa14.54□□□□□ -0.08
TOP3A-215ENST00000583328 NFIBO00712 420 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 NMT2O60551 498 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 CALML3P27482 149 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 SLC16A2P36021 539 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 PDE4DQ08499 809 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 TTBK2Q6IQ55 1244 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 RASGRP2Q7LDG7 609 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 CCDC155Q8N6L0 562 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 GDPD5Q8WTR4 605 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 DCAF4Q8WV16 495 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 COPS5Q92905 334 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 SEC62Q99442 399 aaKnown RBP14.53□□□□□ -0.08
TOP3A-215ENST00000583328 MPHOSPH6Q99547 160 aaKnown RBP14.53□□□□□ -0.08
TOP3A-215ENST00000583328 RANBP17Q9H2T7 1088 aaKnown RBP14.53□□□□□ -0.08
TOP3A-215ENST00000583328 IL17RBQ9NRM6 502 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 MYH4Q9Y623 1939 aa14.53□□□□□ -0.08
TOP3A-215ENST00000583328 LCHNA4D1U4 455 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms