RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 SLC30A10Q6XR72 485 aa28.24■■■□□ 2.11
MIR3960-201ENST00000583311 TRIM22Q8IYM9 498 aa28.24■■■□□ 2.11
MIR3960-201ENST00000583311 TMEM106CQ9BVX2 250 aa28.24■■■□□ 2.11
MIR3960-201ENST00000583311 RNF26Q9BY78 433 aaPredicted RBP28.24■■■□□ 2.11
MIR3960-201ENST00000583311 HMX1Q9NP08 348 aaPredicted RBP28.24■■■□□ 2.11
MIR3960-201ENST00000583311 SMCHD1A6NHR9 2005 aa28.24■■■□□ 2.11
MIR3960-201ENST00000583311 RPTORQ8N122 1335 aa28.23■■■□□ 2.11
MIR3960-201ENST00000583311 SYNGAP1Q96PV0 1343 aa28.23■■■□□ 2.11
MIR3960-201ENST00000583311 hCG_1642624A0A1W2PR95 340 aa28.23■■■□□ 2.11
MIR3960-201ENST00000583311 ASB14A6NK59 587 aa28.23■■■□□ 2.11
MIR3960-201ENST00000583311 CFBP00751 764 aa28.23■■■□□ 2.11
MIR3960-201ENST00000583311 MAP3K21Q5TCX8 1036 aa28.23■■■□□ 2.11
MIR3960-201ENST00000583311 NOL8Q76FK4 1167 aaKnown RBP28.23■■■□□ 2.11
MIR3960-201ENST00000583311 HEATR3Q7Z4Q2 680 aa28.23■■■□□ 2.11
MIR3960-201ENST00000583311 NRBP1Q9UHY1 535 aa28.23■■■□□ 2.11
MIR3960-201ENST00000583311 CCDC85CA6NKD9 419 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 B4DLN1 442 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 PRPF3O43395 683 aaKnown RBP28.22■■■□□ 2.11
MIR3960-201ENST00000583311 IGHA2P01877 340 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 CCL5P13501 91 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 CYP2C19P33261 490 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 MRPL12P52815 198 aaKnown RBP28.22■■■□□ 2.11
MIR3960-201ENST00000583311 GHRHRQ02643 423 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 CACNB2Q08289 660 aaPredicted RBP28.22■■■□□ 2.11
MIR3960-201ENST00000583311 NTRK3Q16288 839 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 DNERQ8NFT8 737 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 LIMCH1Q9UPQ0 1083 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 CNPY2Q9Y2B0 182 aa28.22■■■□□ 2.11
MIR3960-201ENST00000583311 GCOM1H8Y6P7 765 aaPredicted RBP28.21■■■□□ 2.11
MIR3960-201ENST00000583311 MYCP01106 439 aaPredicted RBP28.21■■■□□ 2.11
MIR3960-201ENST00000583311 POLR2MP0CAP2 368 aa28.21■■■□□ 2.11
MIR3960-201ENST00000583311 HSD17B4P51659 736 aa28.21■■■□□ 2.11
MIR3960-201ENST00000583311 SCRN1Q12765 414 aa28.21■■■□□ 2.11
MIR3960-201ENST00000583311 TRIM32Q13049 653 aa28.21■■■□□ 2.11
MIR3960-201ENST00000583311 PPP1R18Q6NYC8 613 aa28.21■■■□□ 2.11
MIR3960-201ENST00000583311 RNF208Q9H0X6 261 aa28.21■■■□□ 2.11
MIR3960-201ENST00000583311 SOWAHBA6NEL2 793 aa28.2■■■□□ 2.1
MIR3960-201ENST00000583311 SSRP1Q08945 709 aaKnown RBP28.2■■■□□ 2.1
MIR3960-201ENST00000583311 MTFR1Q15390 333 aa28.2■■■□□ 2.1
MIR3960-201ENST00000583311 PFKFB3Q16875 520 aaPredicted RBP28.2■■■□□ 2.1
MIR3960-201ENST00000583311 SYTL5Q8TDW5 730 aaPredicted RBP28.2■■■□□ 2.1
MIR3960-201ENST00000583311 CUL5Q93034 780 aa28.2■■■□□ 2.1
MIR3960-201ENST00000583311 PHKBQ93100 1093 aa28.2■■■□□ 2.1
MIR3960-201ENST00000583311 FGD4Q96M96 766 aa28.2■■■□□ 2.1
MIR3960-201ENST00000583311 SLC26A6Q9BXS9 759 aa28.2■■■□□ 2.1
MIR3960-201ENST00000583311 OPLAHO14841 1288 aa28.19■■■□□ 2.1
MIR3960-201ENST00000583311 SCG2P13521 617 aa28.19■■■□□ 2.1
MIR3960-201ENST00000583311 NAPAP54920 295 aa28.19■■■□□ 2.1
MIR3960-201ENST00000583311 ME3Q16798 604 aa28.19■■■□□ 2.1
MIR3960-201ENST00000583311 TEX2Q8IWB9 1127 aa28.19■■■□□ 2.1
MIR3960-201ENST00000583311 TBC1D5Q92609 795 aa28.19■■■□□ 2.1
MIR3960-201ENST00000583311 ZSCAN31Q96LW9 406 aaPredicted RBP28.19■■■□□ 2.1
MIR3960-201ENST00000583311 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.19■■■□□ 2.1
MIR3960-201ENST00000583311 UNC93B1Q9H1C4 597 aa28.19■■■□□ 2.1
MIR3960-201ENST00000583311 BARHL2Q9NY43 387 aa28.19■■■□□ 2.1
MIR3960-201ENST00000583311 ALDH5A1P51649 535 aaPredicted RBP28.18■■■□□ 2.1
MIR3960-201ENST00000583311 WWC2Q6AWC2 1192 aa28.18■■■□□ 2.1
MIR3960-201ENST00000583311 ARMCX2Q7L311 632 aa28.18■■■□□ 2.1
MIR3960-201ENST00000583311 CCDC12Q8WUD4 166 aaPredicted RBP28.18■■■□□ 2.1
MIR3960-201ENST00000583311 GPKOWQ92917 476 aaPredicted RBP eCLIP28.18■■■□□ 2.1
MIR3960-201ENST00000583311 GTF3C6Q969F1 213 aa28.18■■■□□ 2.1
MIR3960-201ENST00000583311 CYBAP13498 195 aa28.17■■■□□ 2.1
MIR3960-201ENST00000583311 CAPN2P17655 700 aa28.17■■■□□ 2.1
MIR3960-201ENST00000583311 NSUN6Q8TEA1 469 aaKnown RBP28.17■■■□□ 2.1
MIR3960-201ENST00000583311 GLT8D2Q9H1C3 349 aa28.17■■■□□ 2.1
MIR3960-201ENST00000583311 ABHD16BQ9H3Z7 469 aa28.17■■■□□ 2.1
MIR3960-201ENST00000583311 PSTPIP2Q9H939 334 aa28.17■■■□□ 2.1
MIR3960-201ENST00000583311 PAK6Q9NQU5 681 aaPredicted RBP28.17■■■□□ 2.1
MIR3960-201ENST00000583311 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.17■■■□□ 2.1
MIR3960-201ENST00000583311 DEXIO95424 95 aa28.16■■■□□ 2.1
MIR3960-201ENST00000583311 GJB1P08034 283 aa28.16■■■□□ 2.1
MIR3960-201ENST00000583311 CNGA1P29973 690 aa28.16■■■□□ 2.1
MIR3960-201ENST00000583311 SMARCC2Q8TAQ2 1214 aa28.16■■■□□ 2.1
MIR3960-201ENST00000583311 PURBQ96QR8 312 aaKnown RBP28.16■■■□□ 2.1
MIR3960-201ENST00000583311 SH2B1Q9NRF2 756 aaPredicted RBP28.16■■■□□ 2.1
MIR3960-201ENST00000583311 STXBP3O00186 592 aa28.15■■■□□ 2.1
MIR3960-201ENST00000583311 PIK3CDO00329 1044 aa28.15■■■□□ 2.1
MIR3960-201ENST00000583311 MSCO60682 206 aa28.15■■■□□ 2.1
MIR3960-201ENST00000583311 MCM2P49736 904 aa28.15■■■□□ 2.1
MIR3960-201ENST00000583311 RMDN3Q96TC7 470 aa28.15■■■□□ 2.1
MIR3960-201ENST00000583311 ASTN1O14525 1302 aa28.15■■■□□ 2.1
MIR3960-201ENST00000583311 LARGE1O95461 756 aa28.14■■■□□ 2.1
MIR3960-201ENST00000583311 SNAI1O95863 264 aaPredicted RBP28.14■■■□□ 2.1
MIR3960-201ENST00000583311 CCND3P30281 292 aaPredicted RBP28.14■■■□□ 2.1
MIR3960-201ENST00000583311 HOXA13P31271 388 aaPredicted RBP28.14■■■□□ 2.1
MIR3960-201ENST00000583311 ARHGEF16Q5VV41 709 aa28.14■■■□□ 2.1
MIR3960-201ENST00000583311 NECAB1Q8N987 351 aa28.14■■■□□ 2.1
MIR3960-201ENST00000583311 CCDC148Q8NFR7 591 aa28.14■■■□□ 2.1
MIR3960-201ENST00000583311 MORC4Q8TE76 937 aa28.14■■■□□ 2.1
MIR3960-201ENST00000583311 TAAR1Q96RJ0 339 aa28.14■■■□□ 2.1
MIR3960-201ENST00000583311 IWS1Q96ST2 819 aa28.14■■■□□ 2.1
MIR3960-201ENST00000583311 COL20A1Q9P218 1284 aa28.14■■■□□ 2.1
MIR3960-201ENST00000583311 CENPFP49454 3210 aa28.14■■■□□ 2.09
MIR3960-201ENST00000583311 STK36Q9NRP7 1315 aa28.14■■■□□ 2.09
MIR3960-201ENST00000583311 LCTP09848 1927 aa28.14■■■□□ 2.09
MIR3960-201ENST00000583311 PDE4DQ08499 809 aa28.13■■■□□ 2.09
MIR3960-201ENST00000583311 ACVR2BQ13705 512 aa28.13■■■□□ 2.09
MIR3960-201ENST00000583311 PKN1Q16512 942 aa28.13■■■□□ 2.09
MIR3960-201ENST00000583311 PRAMEF19Q5SWL8 479 aa28.13■■■□□ 2.09
MIR3960-201ENST00000583311 DEFB118Q96PH6 123 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms