RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 FAM207AQ9NSI2 230 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-214ENST00000582981 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 FNTAP49354 379 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
TOP3A-214ENST00000582981 DIXDC1Q155Q3 683 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 LETM2Q2VYF4 491 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 PREPLQ4J6C6 727 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-214ENST00000582981 NAALADL2Q58DX5 795 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 FERMT2Q96AC1 680 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 CCDC114Q96M63 670 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 GRIN2DO15399 1336 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 KCNQ2O43526 872 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 NCK2O43639 380 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 MYO1BO43795 1136 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 EZRP15311 586 aaKnown RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 UBA7P41226 1012 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 MECOMQ03112 1051 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 RRP36Q96EU6 259 aaKnown RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 CCDC194A0A1B0GVG4 234 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 EPHB6O15197 1021 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 IDEP14735 1019 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 MTIF2P46199 727 aaKnown RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 TFAP4Q01664 338 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 DDR1Q08345 913 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 TUBB2AQ13885 445 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 DYMQ7RTS9 669 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 DNAAF5Q86Y56 855 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 CSGALNACT2Q8N6G5 542 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 JAKMIP2Q96AA8 810 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 TUBB2BQ9BVA1 445 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 SLC39A2Q9NP94 309 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 LIMA1Q9UHB6 759 aaKnown RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 MCM3P25205 808 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 AMPD2Q01433 879 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 APBA1Q02410 837 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 TBC1D8BQ0IIM8 1120 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 STK4Q13043 487 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 SLC35G1Q2M3R5 365 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 TSR1Q2NL82 804 aaKnown RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 MB21D1Q8N884 522 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 TBC1D22AQ8WUA7 517 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 FAM84BQ96KN1 310 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 DCP1AQ9NPI6 582 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 A1CFQ9NQ94 594 aaKnown RBP11.67□□□□□ -0.54
TOP3A-214ENST00000582981 LRWD1Q9UFC0 647 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 RWDD2AQ9UIY3 292 aa11.67□□□□□ -0.54
TOP3A-214ENST00000582981 ASIC1P78348 528 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 ZNF658Q5TYW1 1059 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-214ENST00000582981 INTS5Q6P9B9 1019 aaKnown RBP11.66□□□□□ -0.54
TOP3A-214ENST00000582981 CCDC13Q8IYE1 715 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 OR8K1Q8NGG5 319 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
TOP3A-214ENST00000582981 DDX20Q9UHI6 824 aaKnown RBP11.66□□□□□ -0.54
TOP3A-214ENST00000582981 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.66□□□□□ -0.54
TOP3A-214ENST00000582981 MYH10P35580 1976 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 CHD4Q14839 1912 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 IL6STP40189 918 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-214ENST00000582981 GUCY1A3Q02108 690 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 PDE4DQ08499 809 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 LRRC41Q15345 812 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 CCDC96Q2M329 555 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 BLIDQ8IZY5 108 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 GLIS3Q8NEA6 775 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 ARL8AQ96BM9 186 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 TBC1D31Q96DN5 1066 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 TACO1Q9BSH4 297 aaKnown RBP11.66□□□□□ -0.54
TOP3A-214ENST00000582981 SAR1BQ9Y6B6 198 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 CAPN6Q9Y6Q1 641 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 LMTK3Q96Q04 1460 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
TOP3A-214ENST00000582981 MYH13Q9UKX3 1938 aa11.66□□□□□ -0.54
TOP3A-214ENST00000582981 FSBPO95073 299 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 NTSR2O95665 410 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 PLCG1P19174 1290 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 SEC24CP53992 1094 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 SEMA3FQ13275 785 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 SNCBQ16143 134 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 GRIK5Q16478 980 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 MICALCLQ6ZW33 695 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 PROCA1Q8NCQ7 364 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 TUBGCP2Q9BSJ2 902 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 DISC1Q9NRI5 854 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 CCDC87Q9NVE4 849 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 RBM28Q9NW13 759 aaKnown RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 MAGEC2Q9UBF1 373 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 DDX60Q8IY21 1712 aaKnown RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 BUB1O43683 1085 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 CAMTA2O94983 1202 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 TECP42680 631 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 NAP1L1P55209 391 aaKnown RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 EIF6P56537 245 aaKnown RBP11.65□□□□□ -0.54
TOP3A-214ENST00000582981 ARID5AQ03989 594 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 CAVIN4Q5BKX8 364 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 DTHD1Q6ZMT9 781 aa11.65□□□□□ -0.54
TOP3A-214ENST00000582981 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms