RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SLURP2P0DP57 97 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 ATP1A3P13637 1013 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 CLK2P49760 499 aaKnown RBP25.54■■□□□ 1.68
CCDC47-204ENST00000582252 CABP7Q86V35 215 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 SYNRGQ9UMZ2 1314 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 IQCA1LA6NCM1 817 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 F5H6K3 240 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 GH2P01242 217 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 MAP3K10Q02779 954 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 KLRC3Q07444 240 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 LRMPQ12912 555 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 CALCRLQ16602 461 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 USP50Q70EL3 339 aaPredicted RBP25.54■■□□□ 1.68
CCDC47-204ENST00000582252 CDAN1Q8IWY9 1227 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 PSTPIP2Q9H939 334 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 ARHGEF10LQ9HCE6 1279 aa25.54■■□□□ 1.68
CCDC47-204ENST00000582252 ATAD5Q96QE3 1844 aa25.53■■□□□ 1.68
CCDC47-204ENST00000582252 PPP1R11O60927 126 aaPredicted RBP25.53■■□□□ 1.68
CCDC47-204ENST00000582252 GCFC2P16383 781 aaKnown RBP25.53■■□□□ 1.68
CCDC47-204ENST00000582252 FMR1Q06787 632 aaKnown RBP eCLIP25.53■■□□□ 1.68
CCDC47-204ENST00000582252 CDC37Q16543 378 aaPredicted RBP25.53■■□□□ 1.68
CCDC47-204ENST00000582252 SPATA1Q5VX52 437 aa25.53■■□□□ 1.68
CCDC47-204ENST00000582252 PPP4R3AQ6IN85 833 aa25.53■■□□□ 1.68
CCDC47-204ENST00000582252 HOOK2Q96ED9 719 aa25.53■■□□□ 1.68
CCDC47-204ENST00000582252 SCAF8Q9UPN6 1271 aaKnown RBP25.53■■□□□ 1.68
CCDC47-204ENST00000582252 RPN1P04843 607 aaKnown RBP25.52■■□□□ 1.68
CCDC47-204ENST00000582252 ZNF18P17022 549 aa25.52■■□□□ 1.68
CCDC47-204ENST00000582252 EPHX2P34913 555 aa25.52■■□□□ 1.68
CCDC47-204ENST00000582252 QRICH1Q2TAL8 776 aa25.52■■□□□ 1.68
CCDC47-204ENST00000582252 SIAH1Q8IUQ4 282 aa25.52■■□□□ 1.68
CCDC47-204ENST00000582252 CCDC47Q96A33 483 aaKnown RBP25.52■■□□□ 1.68
CCDC47-204ENST00000582252 CALML4Q96GE6 196 aa25.52■■□□□ 1.68
CCDC47-204ENST00000582252 GTPBP4Q9BZE4 634 aaKnown RBP25.52■■□□□ 1.68
CCDC47-204ENST00000582252 CUL4BQ13620 913 aa25.51■■□□□ 1.68
CCDC47-204ENST00000582252 ZNF658Q5TYW1 1059 aaPredicted RBP25.51■■□□□ 1.68
CCDC47-204ENST00000582252 POTEDQ86YR6 584 aa25.51■■□□□ 1.68
CCDC47-204ENST00000582252 BLZF1Q9H2G9 400 aa25.51■■□□□ 1.68
CCDC47-204ENST00000582252 NDUFB10O96000 172 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 BMP3P12645 472 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 CASP1P29466 404 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 CDC25AP30304 524 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 FXR2P51116 673 aaKnown RBP eCLIP25.51■■□□□ 1.673e-7■■■■□ 23.2
CCDC47-204ENST00000582252 TRAF1Q13077 416 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 IGSF22Q8N9C0 903 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 STAMQ92783 540 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 MTMR9Q96QG7 549 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 PCDHA1Q9Y5I3 950 aa25.51■■□□□ 1.67
CCDC47-204ENST00000582252 SFPQP23246 707 aaKnown RBP eCLIP25.5■■□□□ 1.67
CCDC47-204ENST00000582252 AMPD3Q01432 767 aa25.5■■□□□ 1.67
CCDC47-204ENST00000582252 KCNB1Q14721 858 aa25.5■■□□□ 1.67
CCDC47-204ENST00000582252 TRMT44Q8IYL2 757 aaKnown RBP25.5■■□□□ 1.67
CCDC47-204ENST00000582252 ZC3H15Q8WU90 426 aaKnown RBP25.5■■□□□ 1.67
CCDC47-204ENST00000582252 AMNQ9BXJ7 453 aa25.5■■□□□ 1.67
CCDC47-204ENST00000582252 KBTBD4Q9NVX7 518 aa25.5■■□□□ 1.67
CCDC47-204ENST00000582252 PP2D1A8MPX8 630 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 TECP42680 631 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 IKQ13123 557 aaPredicted RBP25.49■■□□□ 1.67
CCDC47-204ENST00000582252 UBE2SQ16763 222 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 SHROOM1Q2M3G4 852 aaPredicted RBP25.49■■□□□ 1.67
CCDC47-204ENST00000582252 SYDE2Q5VT97 1194 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 MIGA2Q7L4E1 593 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 C17orf53Q8N3J3 647 aaPredicted RBP25.49■■□□□ 1.67
CCDC47-204ENST00000582252 DCPSQ96C86 337 aaKnown RBP25.49■■□□□ 1.67
CCDC47-204ENST00000582252 MTRQ99707 1265 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 R3HCC1Q9Y3T6 440 aaKnown RBP25.49■■□□□ 1.67
CCDC47-204ENST00000582252 PPP1R3GB7ZBB8 358 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 SKILP12757 684 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 AP3B2Q13367 1082 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 PDIA5Q14554 519 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 TPD52L1Q16890 204 aaPredicted RBP25.49■■□□□ 1.67
CCDC47-204ENST00000582252 NAALADL2Q58DX5 795 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 DCAF15Q66K64 600 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 KLHL10Q6JEL2 608 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 BTNL9Q6UXG8 535 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 VSTM4Q8IW00 320 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 CTAGE1Q96RT6 745 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 GOPCQ9HD26 462 aa25.49■■□□□ 1.67
CCDC47-204ENST00000582252 TXKP42681 527 aa25.48■■□□□ 1.67
CCDC47-204ENST00000582252 TEX2Q8IWB9 1127 aa25.48■■□□□ 1.67
CCDC47-204ENST00000582252 TAF1DQ9H5J8 278 aaPredicted RBP25.48■■□□□ 1.67
CCDC47-204ENST00000582252 LRWD1Q9UFC0 647 aa25.48■■□□□ 1.67
CCDC47-204ENST00000582252 RWDD2AQ9UIY3 292 aa25.48■■□□□ 1.67
CCDC47-204ENST00000582252 MYH7BA7E2Y1 1941 aa25.48■■□□□ 1.67
CCDC47-204ENST00000582252 TPM2P07951 284 aa25.47■■□□□ 1.67
CCDC47-204ENST00000582252 CD44P16070 742 aaKnown RBP25.47■■□□□ 1.67
CCDC47-204ENST00000582252 PLCG1P19174 1290 aa25.47■■□□□ 1.67
CCDC47-204ENST00000582252 STIM1Q13586 685 aa25.47■■□□□ 1.67
CCDC47-204ENST00000582252 NBPF12Q5TAG4 269 aaPredicted RBP25.47■■□□□ 1.67
CCDC47-204ENST00000582252 PNMA8AQ86V59 439 aaPredicted RBP25.47■■□□□ 1.67
CCDC47-204ENST00000582252 FBXO11Q86XK2 927 aa25.47■■□□□ 1.67
CCDC47-204ENST00000582252 SULF1Q8IWU6 871 aa25.47■■□□□ 1.67
CCDC47-204ENST00000582252 SH2D4AQ9H788 454 aa25.47■■□□□ 1.67
CCDC47-204ENST00000582252 DDX25Q9UHL0 483 aaKnown RBP25.47■■□□□ 1.67
CCDC47-204ENST00000582252 TMEM232C9JQI7 657 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 TDP2O95551 362 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 CCZ1BP86790 482 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 CCZ1P86791 482 aaPredicted RBP25.46■■□□□ 1.67
CCDC47-204ENST00000582252 PAK1Q13153 545 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 CDK5RAP3Q96JB5 506 aa25.46■■□□□ 1.67
CCDC47-204ENST00000582252 STK17AQ9UEE5 414 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms