RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 ZBTB5O15062 677 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 PTGS1P23219 599 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 CALML3P27482 149 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 CST5P28325 142 aaPredicted RBP14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 ADCYAP1R1P41586 468 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 GJA9P57773 515 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 CASC1Q6TDU7 716 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 CATIPQ7Z7H3 387 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 RNF180Q86T96 592 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 C7orf61Q8IZ16 206 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 ZNF654Q8IZM8 581 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 TMTC2Q8N394 836 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 DNERQ8NFT8 737 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 TSEN34Q9BSV6 310 aaKnown RBP14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 COL20A1Q9P218 1284 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 PCDH10Q9P2E7 1040 aa14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 ADD3Q9UEY8 706 aaKnown RBP14.42□□□□□ -0.1
SMARCD2-209ENST00000581832 KIAA1217Q5T5P2 1943 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 RBM47A0AV96 593 aaKnown RBP14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 DDAH1O94760 285 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 SMPD1P17405 629 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 ATN1P54259 1190 aaPredicted RBP14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 HABP4Q5JVS0 413 aaKnown RBP14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 RNF20Q5VTR2 975 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 IQSEC1Q6DN90 963 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 EEPD1Q7L9B9 569 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 SGMS1Q86VZ5 419 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 FBXO16Q8IX29 292 aaPredicted RBP14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 SYTL5Q8TDW5 730 aaPredicted RBP14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 FERMT2Q96AC1 680 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 NEK1Q96PY6 1258 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 PIGSQ96S52 555 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 MYL10Q9BUA6 226 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 AMNQ9BXJ7 453 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 LRRC2Q9BYS8 371 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 VTA1Q9NP79 307 aa14.41□□□□□ -0.1
SMARCD2-209ENST00000581832 DHX16O60231 1041 aaKnown RBP14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 SMARCA1P28370 1054 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 HSPA4P34932 840 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 HSD17B4P51659 736 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 TNFAIP2Q03169 654 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 KCNA10Q16322 511 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 SRBD1Q8N5C6 995 aaKnown RBP14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 TAAR1Q96RJ0 339 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 GDF15Q99988 308 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 SPZ1Q9BXG8 430 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 RBM27Q9P2N5 1060 aaKnown RBP14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 ZMYND8Q9ULU4 1186 aaPredicted RBP14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 MRPL11Q9Y3B7 192 aaKnown RBP14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 PCDHA1Q9Y5I3 950 aa14.4□□□□□ -0.1
SMARCD2-209ENST00000581832 PNMA6FA0A0J9YX94 578 aa14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 A0A1W2PQ45 241 aaPredicted RBP14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 A0A1W2PQY0 241 aa14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 MYCNP04198 464 aaPredicted RBP14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 CENPBP07199 599 aaPredicted RBP14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 SYN1P17600 705 aa14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 ACLYP53396 1101 aa14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 RTP1P59025 263 aa14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 DHX32Q7L7V1 743 aaKnown RBP14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 MCF2L2Q86YR7 1114 aa14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 NUP133Q8WUM0 1156 aa14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 Q9Y3F1 56 aa14.39□□□□□ -0.11
SMARCD2-209ENST00000581832 MOXD2PA6NHM9 499 aa14.38□□□□□ -0.11
SMARCD2-209ENST00000581832 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
SMARCD2-209ENST00000581832 RXRAP19793 462 aa14.38□□□□□ -0.11
SMARCD2-209ENST00000581832 HOMER1Q86YM7 354 aa14.38□□□□□ -0.11
SMARCD2-209ENST00000581832 TCEANC2Q96MN5 208 aa14.38□□□□□ -0.11
SMARCD2-209ENST00000581832 MAP3K20Q9NYL2 800 aaKnown RBP14.38□□□□□ -0.11
SMARCD2-209ENST00000581832 BRPF3Q9ULD4 1205 aa14.38□□□□□ -0.11
SMARCD2-209ENST00000581832 SNX14Q9Y5W7 946 aa14.38□□□□□ -0.11
SMARCD2-209ENST00000581832 LTBP2Q14767 1821 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 CCDC69A6NI79 296 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 EPB41L2O43491 1005 aaKnown RBP14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 ASGR1P07306 291 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 C6orf222P0C671 652 aaPredicted RBP14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 KIF5BP33176 963 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 BMP8BP34820 402 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 CDK7P50613 346 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 BEX3Q00994 111 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 KRT32Q14532 448 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 TRIM60Q495X7 471 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 DUSP28Q4G0W2 176 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 GNASQ5JWF2 1037 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 TLK2Q86UE8 772 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 CMTR1Q8N1G2 835 aaKnown RBP14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 SAMD3Q8N6K7 520 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 FANCBQ8NB91 859 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 CTCFLQ8NI51 663 aaPredicted RBP14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 WDR11Q9BZH6 1224 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 MYH7BA7E2Y1 1941 aa14.37□□□□□ -0.11
SMARCD2-209ENST00000581832 DYNC1LI2O43237 492 aaPredicted RBP14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 ARIH2O95376 493 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 CFBP00751 764 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 CALM1P0DP23 149 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 CALM2P0DP24 149 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 CALM3P0DP25 149 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 CPA1P15085 419 aa14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 MAGEA10P43363 369 aaPredicted RBP14.36□□□□□ -0.11
SMARCD2-209ENST00000581832 FUT2Q10981 343 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms