RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PDGFCQ9NRA1 345 aa24.49■■□□□ 1.51
CCDC42-203ENST00000581598 TBX21Q9UL17 535 aa24.49■■□□□ 1.51
CCDC42-203ENST00000581598 PTPDC1A2A3K4 754 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 TNKSO95271 1327 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 GOLGA8HP0CJ92 632 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 BEX3Q00994 111 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 ASPRV1Q53RT3 343 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 SLC30A10Q6XR72 485 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 Q7L0L9 218 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 DNERQ8NFT8 737 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 RUFY2Q8WXA3 655 aa24.48■■□□□ 1.51
CCDC42-203ENST00000581598 DDX49Q9Y6V7 483 aaKnown RBP24.48■■□□□ 1.51
CCDC42-203ENST00000581598 MYH6P13533 1939 aa24.47■■□□□ 1.51
CCDC42-203ENST00000581598 RBM47A0AV96 593 aaKnown RBP24.47■■□□□ 1.51
CCDC42-203ENST00000581598 ZEB2O60315 1214 aa24.47■■□□□ 1.51
CCDC42-203ENST00000581598 FSCN1Q16658 493 aaKnown RBP24.47■■□□□ 1.51
CCDC42-203ENST00000581598 DUSP28Q4G0W2 176 aa24.47■■□□□ 1.51
CCDC42-203ENST00000581598 EEPD1Q7L9B9 569 aa24.47■■□□□ 1.51
CCDC42-203ENST00000581598 SLC43A3Q8NBI5 491 aa24.47■■□□□ 1.51
CCDC42-203ENST00000581598 VTI1AQ96AJ9 217 aa24.47■■□□□ 1.51
CCDC42-203ENST00000581598 DYNC1LI2O43237 492 aaPredicted RBP24.46■■□□□ 1.51
CCDC42-203ENST00000581598 TIMP1P01033 207 aa24.46■■□□□ 1.51
CCDC42-203ENST00000581598 EDNRBP24530 442 aa24.46■■□□□ 1.51
CCDC42-203ENST00000581598 RPS6P62753 249 aaKnown RBP24.46■■□□□ 1.51
CCDC42-203ENST00000581598 FPGSQ05932 587 aa24.46■■□□□ 1.51
CCDC42-203ENST00000581598 KIAA1211Q6ZU35 1233 aa24.46■■□□□ 1.51
CCDC42-203ENST00000581598 FAM126BQ8IXS8 530 aa24.46■■□□□ 1.51
CCDC42-203ENST00000581598 MPHOSPH6Q99547 160 aaKnown RBP24.46■■□□□ 1.51
CCDC42-203ENST00000581598 UBAC1Q9BSL1 405 aa24.46■■□□□ 1.51
CCDC42-203ENST00000581598 UBA5Q9GZZ9 404 aa24.46■■□□□ 1.51
CCDC42-203ENST00000581598 CHMLP26374 656 aa24.45■■□□□ 1.5
CCDC42-203ENST00000581598 CALML3P27482 149 aa24.45■■□□□ 1.5
CCDC42-203ENST00000581598 CDC37Q16543 378 aaPredicted RBP24.45■■□□□ 1.5
CCDC42-203ENST00000581598 STXBP5LQ9Y2K9 1186 aa24.45■■□□□ 1.5
CCDC42-203ENST00000581598 ABCB11O95342 1321 aa24.44■■□□□ 1.5
CCDC42-203ENST00000581598 DLL1O00548 723 aa24.44■■□□□ 1.5
CCDC42-203ENST00000581598 TLR3O15455 904 aaKnown RBP24.44■■□□□ 1.5
CCDC42-203ENST00000581598 CD4P01730 458 aa24.44■■□□□ 1.5
CCDC42-203ENST00000581598 PARP1P09874 1014 aaKnown RBP24.44■■□□□ 1.5
CCDC42-203ENST00000581598 SMAD3P84022 425 aaKnown RBP24.44■■□□□ 1.5
CCDC42-203ENST00000581598 SEC23AQ15436 765 aa24.44■■□□□ 1.5
CCDC42-203ENST00000581598 CXCL17Q6UXB2 119 aa24.44■■□□□ 1.5
CCDC42-203ENST00000581598 ADGRF4Q8IZF3 695 aa24.44■■□□□ 1.5
CCDC42-203ENST00000581598 CPVLQ9H3G5 476 aa24.44■■□□□ 1.5
CCDC42-203ENST00000581598 B4DLN1 442 aa24.43■■□□□ 1.5
CCDC42-203ENST00000581598 MRPL12P52815 198 aaKnown RBP24.43■■□□□ 1.5
CCDC42-203ENST00000581598 EPHB4P54760 987 aa24.43■■□□□ 1.5
CCDC42-203ENST00000581598 TMEM63BQ5T3F8 832 aa24.43■■□□□ 1.5
CCDC42-203ENST00000581598 IFIT1BQ5T764 474 aaKnown RBP24.43■■□□□ 1.5
CCDC42-203ENST00000581598 MFSD5Q6N075 450 aa24.43■■□□□ 1.5
CCDC42-203ENST00000581598 WDR11Q9BZH6 1224 aa24.43■■□□□ 1.5
CCDC42-203ENST00000581598 NKRFO15226 690 aaKnown RBP eCLIP24.42■■□□□ 1.5
CCDC42-203ENST00000581598 PDE4DQ08499 809 aa24.42■■□□□ 1.5
CCDC42-203ENST00000581598 USH1GQ495M9 461 aa24.42■■□□□ 1.5
CCDC42-203ENST00000581598 U3KPZ7 1027 aaPredicted RBP24.42■■□□□ 1.5
CCDC42-203ENST00000581598 CYP21A2P08686 494 aa24.41■■□□□ 1.5
CCDC42-203ENST00000581598 PTGS1P23219 599 aa24.41■■□□□ 1.5
CCDC42-203ENST00000581598 TRDNQ13061 729 aa24.41■■□□□ 1.5
CCDC42-203ENST00000581598 ITGA7Q13683 1181 aa24.41■■□□□ 1.5
CCDC42-203ENST00000581598 JMJD4Q9H9V9 463 aa24.41■■□□□ 1.5
CCDC42-203ENST00000581598 GRIN2DO15399 1336 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 SGSM2O43147 1006 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 PTH1RQ03431 593 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 PPIGQ13427 754 aaKnown RBP eCLIP24.4■■□□□ 1.5
CCDC42-203ENST00000581598 QRICH1Q2TAL8 776 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 ZNF697Q5TEC3 545 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 CYB5R4Q7L1T6 521 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 MCF2L2Q86YR7 1114 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 SCFD2Q8WU76 684 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 RNPC3Q96LT9 517 aaKnown RBP24.4■■□□□ 1.5
CCDC42-203ENST00000581598 POLR3EQ9NVU0 708 aa24.4■■□□□ 1.5
CCDC42-203ENST00000581598 LAMA2P24043 3122 aaKnown RBP24.4■■□□□ 1.5
CCDC42-203ENST00000581598 CPT1AP50416 773 aa24.39■■□□□ 1.49
CCDC42-203ENST00000581598 FBXO11Q86XK2 927 aa24.39■■□□□ 1.49
CCDC42-203ENST00000581598 TMEM199Q8N511 208 aa24.39■■□□□ 1.49
CCDC42-203ENST00000581598 MRPL11Q9Y3B7 192 aaKnown RBP24.39■■□□□ 1.49
CCDC42-203ENST00000581598 PPP2R5BQ15173 497 aa24.38■■□□□ 1.49
CCDC42-203ENST00000581598 SYTL5Q8TDW5 730 aaPredicted RBP24.38■■□□□ 1.49
CCDC42-203ENST00000581598 MTMR8Q96EF0 704 aa24.38■■□□□ 1.49
CCDC42-203ENST00000581598 GUCD1Q96NT3 240 aa24.38■■□□□ 1.49
CCDC42-203ENST00000581598 SCN10AQ9Y5Y9 1956 aa24.38■■□□□ 1.49
CCDC42-203ENST00000581598 PALM3A6NDB9 673 aaPredicted RBP24.37■■□□□ 1.49
CCDC42-203ENST00000581598 GHRHRQ02643 423 aa24.37■■□□□ 1.49
CCDC42-203ENST00000581598 STAG2Q8N3U4 1231 aa24.37■■□□□ 1.49
CCDC42-203ENST00000581598 OR6J1Q8NGC5 347 aa24.37■■□□□ 1.49
CCDC42-203ENST00000581598 MAD2L2Q9UI95 211 aa24.37■■□□□ 1.49
CCDC42-203ENST00000581598 KIAA1217Q5T5P2 1943 aa24.37■■□□□ 1.49
CCDC42-203ENST00000581598 TMEM265A0A087WTH1 108 aa24.36■■□□□ 1.49
CCDC42-203ENST00000581598 KLRF2D3W0D1 207 aa24.36■■□□□ 1.49
CCDC42-203ENST00000581598 DHX16O60231 1041 aaKnown RBP24.36■■□□□ 1.49
CCDC42-203ENST00000581598 PURAQ00577 322 aaKnown RBP24.36■■□□□ 1.49
CCDC42-203ENST00000581598 BRDTQ58F21 947 aaPredicted RBP24.36■■□□□ 1.49
CCDC42-203ENST00000581598 NSUN6Q8TEA1 469 aaKnown RBP24.36■■□□□ 1.49
CCDC42-203ENST00000581598 TBC1D5Q92609 795 aa24.36■■□□□ 1.49
CCDC42-203ENST00000581598 IWS1Q96ST2 819 aa24.36■■□□□ 1.49
CCDC42-203ENST00000581598 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.36■■□□□ 1.49
CCDC42-203ENST00000581598 AMNQ9BXJ7 453 aa24.36■■□□□ 1.49
CCDC42-203ENST00000581598 A6NJR5 290 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 KPNA6O60684 536 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 TTLL4Q14679 1199 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms