RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 ZMYM6O95789 1325 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 ZNF335Q9H4Z2 1342 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 UBE2Q2LH0YL09 131 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 KCNJ6P48051 423 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TDO2P48775 406 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 ST13P50502 369 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 SH3BGRP55822 239 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 MCCD1P59942 119 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 GRIN1Q05586 938 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 WASHC5Q12768 1159 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 DDX42Q86XP3 938 aaKnown RBP eCLIP4.67□□□□□ -1.66
RTTN-206ENST00000581161 STAMQ92783 540 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 N4BP2L2Q92802 583 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 NR1H4Q96RI1 486 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 SLF1Q9BQI6 1058 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.67□□□□□ -1.66
RTTN-206ENST00000581161 TRIM56Q9BRZ2 755 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 UBXN6Q9BZV1 441 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 CPSF2Q9P2I0 782 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 ANGEL1Q9UNK9 670 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 N4BP1O75113 896 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 DPYDQ12882 1025 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 CLUL1Q15846 466 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 RESP18Q5W5W9 173 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TBC1D10CQ8IV04 446 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SMYD4Q8IYR2 804 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 ANKS4BQ8N8V4 417 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 ARHGEF1Q92888 912 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 EXOC4Q96A65 974 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SHISA4Q96DD7 197 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TRIM8Q9BZR9 551 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 NAPBQ9H115 298 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TAB2Q9NYJ8 693 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 LMCD1Q9NZU5 365 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TUBE1Q9UJT0 475 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 CHD4Q14839 1912 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 BTBD18B2RXH4 712 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 H0YC42 278 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 PPP1R12AO14974 1030 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 PPFIA4O75335 1185 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 PRDM1O75626 825 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 KRT8P05787 483 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 IFNA8P32881 189 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 NLRP5P59047 1200 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 PPP1R7Q15435 360 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 CHRNA2Q15822 529 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 GSTA5Q7RTV2 222 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SLC35F6Q8N357 371 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 VGLL2Q8N8G2 317 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 MLKLQ8NB16 471 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SPDYE1Q8NFV5 336 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 SDCCAG3Q96C92 435 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 HINFPQ9BQA5 517 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 BLZF1Q9H2G9 400 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SUGCTQ9HAC7 445 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SCHIP1Q9P0W5 487 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 LCMT1Q9UIC8 334 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 HPS5Q9UPZ3 1129 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 JRKLQ9Y4A0 524 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 UBR3Q6ZT12 1888 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TEX33O43247 280 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 PPP6R2O75170 966 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TCF3P15923 654 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 CDC27P30260 824 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 PLCD1P51178 756 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 PHEXP78562 749 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 PNMA8AQ86V59 439 aaPredicted RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 NOSTRINQ8IVI9 506 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TC2NQ8N9U0 490 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 TRIML1Q8N9V2 468 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SCG3Q8WXD2 468 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.67□□□□□ -1.66
RTTN-206ENST00000581161 SENP2Q9HC62 589 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SCOCQ9UIL1 159 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 CDC23Q9UJX2 597 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 DENND2AQ9ULE3 1009 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SPDYE2BA6NHP3 402 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 GOLGA8RI6L899 631 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 CCNB2O95067 398 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 SPDYE6P0CI01 402 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 CASP1P29466 404 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 IFIT5Q13325 482 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 TTLL7Q6ZT98 887 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 ATG9AQ7Z3C6 839 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 GPIHBP1Q8IV16 184 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 FAM186BQ8IYM0 893 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 GPATCH11Q8N954 259 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 RBM46Q8TBY0 533 aaKnown RBP4.67□□□□□ -1.66
RTTN-206ENST00000581161 APPBP2Q92624 585 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 FUT8Q9BYC5 575 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 VPS16Q9H269 839 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 FAM204AQ9H8W3 233 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 RIC8AQ9NPQ8 531 aa4.67□□□□□ -1.66
RTTN-206ENST00000581161 hCG_1642624A0A1W2PR95 340 aa4.66□□□□□ -1.66
RTTN-206ENST00000581161 GOLGA6CA6NDK9 693 aa4.66□□□□□ -1.66
RTTN-206ENST00000581161 MTRF1O75570 445 aaKnown RBP4.66□□□□□ -1.66
RTTN-206ENST00000581161 TFRCP02786 760 aaKnown RBP4.66□□□□□ -1.66
RTTN-206ENST00000581161 GOLGA6DP0CG33 693 aa4.66□□□□□ -1.66
RTTN-206ENST00000581161 MTIF2P46199 727 aaKnown RBP4.66□□□□□ -1.66
RTTN-206ENST00000581161 CCDC40Q4G0X9 1142 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms