RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 KRT23Q9C075 422 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 CNNM2Q9H8M5 875 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 PDGFCQ9NRA1 345 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 MTMR10Q9NXD2 777 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 TBX21Q9UL17 535 aa14.62□□□□□ -0.07
SENP3-204ENST00000580997 A0A0C4DFX4 3053 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 A0A0U1RQG5 324 aaPredicted RBP14.61□□□□□ -0.07
SENP3-204ENST00000580997 RBM47A0AV96 593 aaKnown RBP14.61□□□□□ -0.07
SENP3-204ENST00000580997 B4E1Z4 1266 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 ARVCFO00192 962 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 CABYRO75952 493 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 GOLGA8HP0CJ92 632 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 RAG1P15918 1043 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 ALDH5A1P51649 535 aaPredicted RBP14.61□□□□□ -0.07
SENP3-204ENST00000580997 RNF207Q6ZRF8 634 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 EEPD1Q7L9B9 569 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 TLK2Q86UE8 772 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
SENP3-204ENST00000580997 UBA5Q9GZZ9 404 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 KAT14Q9H8E8 782 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 MCM3APO60318 1980 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 RAD50Q92878 1312 aa14.61□□□□□ -0.07
SENP3-204ENST00000580997 LAMA4Q16363 1823 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 PTPDC1A2A3K4 754 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 TIMP1P01033 207 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 EDNRBP24530 442 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 CHMLP26374 656 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 EPHB4P54760 987 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 RPS6P62753 249 aaKnown RBP14.6□□□□□ -0.07
SENP3-204ENST00000580997 BEX3Q00994 111 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 FSCN1Q16658 493 aaKnown RBP14.6□□□□□ -0.07
SENP3-204ENST00000580997 DUSP28Q4G0W2 176 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 ASPRV1Q53RT3 343 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 TMEM63BQ5T3F8 832 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 SLC30A10Q6XR72 485 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 NOL8Q76FK4 1167 aaKnown RBP14.6□□□□□ -0.07
SENP3-204ENST00000580997 DNERQ8NFT8 737 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 SEZ6LQ9BYH1 1024 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 AP5M1Q9H0R1 490 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 CPVLQ9H3G5 476 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 TNKSO95271 1327 aa14.6□□□□□ -0.07
SENP3-204ENST00000580997 DYNC1LI2O43237 492 aaPredicted RBP14.59□□□□□ -0.07
SENP3-204ENST00000580997 CD4P01730 458 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 CALML3P27482 149 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 FPGSQ05932 587 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 SEC23AQ15436 765 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 MFSD5Q6N075 450 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 CXCL17Q6UXB2 119 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 KIAA1211Q6ZU35 1233 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 FAM126BQ8IXS8 530 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 ADGRF4Q8IZF3 695 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 VTI1AQ96AJ9 217 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 GRIN2DO15399 1336 aa14.59□□□□□ -0.07
SENP3-204ENST00000580997 LCTP09848 1927 aa14.58□□□□□ -0.07
SENP3-204ENST00000580997 CDH23Q9H251 3354 aa14.58□□□□□ -0.08
SENP3-204ENST00000580997 ZEB2O60315 1214 aa14.58□□□□□ -0.08
SENP3-204ENST00000580997 PTGS1P23219 599 aa14.58□□□□□ -0.08
SENP3-204ENST00000580997 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.08
SENP3-204ENST00000580997 SMAD3P84022 425 aaKnown RBP14.58□□□□□ -0.08
SENP3-204ENST00000580997 UBAC1Q9BSL1 405 aa14.58□□□□□ -0.08
SENP3-204ENST00000580997 WDR11Q9BZH6 1224 aa14.58□□□□□ -0.08
SENP3-204ENST00000580997 STXBP5LQ9Y2K9 1186 aa14.58□□□□□ -0.08
SENP3-204ENST00000580997 LRRC37A2A6NM11 1700 aa14.58□□□□□ -0.08
SENP3-204ENST00000580997 SGSM2O43147 1006 aa14.57□□□□□ -0.08
SENP3-204ENST00000580997 CYP21A2P08686 494 aa14.57□□□□□ -0.08
SENP3-204ENST00000580997 PARP1P09874 1014 aaKnown RBP14.57□□□□□ -0.08
SENP3-204ENST00000580997 PTH1RQ03431 593 aa14.57□□□□□ -0.08
SENP3-204ENST00000580997 ITGA7Q13683 1181 aa14.57□□□□□ -0.08
SENP3-204ENST00000580997 CDC37Q16543 378 aaPredicted RBP14.57□□□□□ -0.08
SENP3-204ENST00000580997 USH1GQ495M9 461 aa14.57□□□□□ -0.08
SENP3-204ENST00000580997 IFIT1BQ5T764 474 aaKnown RBP14.57□□□□□ -0.08
SENP3-204ENST00000580997 CYB5R4Q7L1T6 521 aa14.57□□□□□ -0.08
SENP3-204ENST00000580997 MPHOSPH6Q99547 160 aaKnown RBP14.57□□□□□ -0.08
SENP3-204ENST00000580997 JMJD4Q9H9V9 463 aa14.57□□□□□ -0.08
SENP3-204ENST00000580997 ABCB11O95342 1321 aa14.57□□□□□ -0.08
SENP3-204ENST00000580997 B4DLN1 442 aa14.56□□□□□ -0.08
SENP3-204ENST00000580997 NKRFO15226 690 aaKnown RBP eCLIP14.56□□□□□ -0.08
SENP3-204ENST00000580997 TLR3O15455 904 aaKnown RBP14.56□□□□□ -0.08
SENP3-204ENST00000580997 MRPL12P52815 198 aaKnown RBP14.56□□□□□ -0.08
SENP3-204ENST00000580997 PDE4DQ08499 809 aa14.56□□□□□ -0.08
SENP3-204ENST00000580997 QRICH1Q2TAL8 776 aa14.56□□□□□ -0.08
SENP3-204ENST00000580997 C16orf59Q7L2K0 433 aa14.56□□□□□ -0.08
SENP3-204ENST00000580997 TBC1D5Q92609 795 aa14.56□□□□□ -0.08
SENP3-204ENST00000580997 MTMR8Q96EF0 704 aa14.56□□□□□ -0.08
SENP3-204ENST00000580997 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
SENP3-204ENST00000580997 KLRF2D3W0D1 207 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 GHRHRQ02643 423 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 TRDNQ13061 729 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 MCF2L2Q86YR7 1114 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 STAG2Q8N3U4 1231 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 SYTL5Q8TDW5 730 aaPredicted RBP14.55□□□□□ -0.08
SENP3-204ENST00000580997 SCFD2Q8WU76 684 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 MAP4K1Q92918 833 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 RNPC3Q96LT9 517 aaKnown RBP14.55□□□□□ -0.08
SENP3-204ENST00000580997 GUCD1Q96NT3 240 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 MAD2L2Q9UI95 211 aa14.55□□□□□ -0.08
SENP3-204ENST00000580997 MRPL11Q9Y3B7 192 aaKnown RBP14.55□□□□□ -0.08
SENP3-204ENST00000580997 UNC80Q8N2C7 3258 aa14.54□□□□□ -0.08
SENP3-204ENST00000580997 EYSQ5T1H1 3165 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms