RNA–Protein interactions for RNA: ENST00000580977.1

C19orf47-205, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 4

Gene C19orf47, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-205ENST00000580977 PPIGQ13427 754 aaKnown RBP eCLIP17.6■□□□□ 0.41
C19orf47-205ENST00000580977 CXCL17Q6UXB2 119 aa17.6■□□□□ 0.41
C19orf47-205ENST00000580977 SLC43A3Q8NBI5 491 aa17.6■□□□□ 0.41
C19orf47-205ENST00000580977 ANKS1AQ92625 1134 aa17.6■□□□□ 0.41
C19orf47-205ENST00000580977 ZSCAN10Q96SZ4 725 aaPredicted RBP17.6■□□□□ 0.41
C19orf47-205ENST00000580977 KRT23Q9C075 422 aa17.6■□□□□ 0.41
C19orf47-205ENST00000580977 MAF1Q9H063 256 aa17.6■□□□□ 0.41
C19orf47-205ENST00000580977 CNNM2Q9H8M5 875 aa17.6■□□□□ 0.41
C19orf47-205ENST00000580977 DDX49Q9Y6V7 483 aaKnown RBP17.6■□□□□ 0.41
C19orf47-205ENST00000580977 RAD50Q92878 1312 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 TMEM265A0A087WTH1 108 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 B4DLN1 442 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 B4E1Z4 1266 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 CD4P01730 458 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 MRPL12P52815 198 aaKnown RBP17.59■□□□□ 0.41
C19orf47-205ENST00000580977 RPS6P62753 249 aaKnown RBP17.59■□□□□ 0.41
C19orf47-205ENST00000580977 DUSP28Q4G0W2 176 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 ASPRV1Q53RT3 343 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 TMEM199Q8N511 208 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 DNERQ8NFT8 737 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 FAM161BQ96MY7 647 aa17.59■□□□□ 0.41
C19orf47-205ENST00000580977 COL6A3P12111 3177 aa17.58■□□□□ 0.4
C19orf47-205ENST00000580977 TNKSO95271 1327 aa17.58■□□□□ 0.4
C19orf47-205ENST00000580977 RBM47A0AV96 593 aaKnown RBP17.58■□□□□ 0.4
C19orf47-205ENST00000580977 GOLGA8HP0CJ92 632 aa17.58■□□□□ 0.4
C19orf47-205ENST00000580977 ITGA7Q13683 1181 aa17.58■□□□□ 0.4
C19orf47-205ENST00000580977 WDR11Q9BZH6 1224 aa17.58■□□□□ 0.4
C19orf47-205ENST00000580977 ABCB11O95342 1321 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 NKRFO15226 690 aaKnown RBP eCLIP17.57■□□□□ 0.4
C19orf47-205ENST00000580977 EDNRBP24530 442 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 PDE4DQ08499 809 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 CDC37Q16543 378 aaPredicted RBP17.57■□□□□ 0.4
C19orf47-205ENST00000580977 USH1GQ495M9 461 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 PSRC1Q6PGN9 363 aaPredicted RBP17.57■□□□□ 0.4
C19orf47-205ENST00000580977 ENAHQ8N8S7 591 aaPredicted RBP17.57■□□□□ 0.4
C19orf47-205ENST00000580977 RGS22Q8NE09 1264 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 UBAC1Q9BSL1 405 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 PPP1R12CQ9BZL4 782 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 UBA5Q9GZZ9 404 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 ZSWIM5Q9P217 1185 aa17.57■□□□□ 0.4
C19orf47-205ENST00000580977 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
C19orf47-205ENST00000580977 GSPT1P15170 499 aaKnown RBP17.56■□□□□ 0.4
C19orf47-205ENST00000580977 PTGS1P23219 599 aa17.56■□□□□ 0.4
C19orf47-205ENST00000580977 CPT1AP50416 773 aa17.56■□□□□ 0.4
C19orf47-205ENST00000580977 PPP2R5BQ15173 497 aa17.56■□□□□ 0.4
C19orf47-205ENST00000580977 TMEM63BQ5T3F8 832 aa17.56■□□□□ 0.4
C19orf47-205ENST00000580977 TTC22Q5TAA0 569 aa17.56■□□□□ 0.4
C19orf47-205ENST00000580977 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.56■□□□□ 0.4
C19orf47-205ENST00000580977 SEMA6BQ9H3T3 888 aa17.56■□□□□ 0.4
C19orf47-205ENST00000580977 GRIN2DO15399 1336 aa17.55■□□□□ 0.4
C19orf47-205ENST00000580977 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.55■□□□□ 0.4
C19orf47-205ENST00000580977 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.55■□□□□ 0.4
C19orf47-205ENST00000580977 PARP1P09874 1014 aaKnown RBP17.55■□□□□ 0.4
C19orf47-205ENST00000580977 CSF2RAP15509 400 aa17.55■□□□□ 0.4
C19orf47-205ENST00000580977 PDE4AP27815 886 aa17.55■□□□□ 0.4
C19orf47-205ENST00000580977 BRDTQ58F21 947 aaPredicted RBP17.55■□□□□ 0.4
C19orf47-205ENST00000580977 ADGRF4Q8IZF3 695 aa17.55■□□□□ 0.4
C19orf47-205ENST00000580977 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
C19orf47-205ENST00000580977 SCFD2Q8WU76 684 aa17.55■□□□□ 0.4
C19orf47-205ENST00000580977 CDX2Q99626 313 aaPredicted RBP17.55■□□□□ 0.4
C19orf47-205ENST00000580977 TTYH1Q9H313 450 aaPredicted RBP17.55■□□□□ 0.4
C19orf47-205ENST00000580977 CPVLQ9H3G5 476 aa17.55■□□□□ 0.4
C19orf47-205ENST00000580977 HIPK3Q9H422 1215 aa17.55■□□□□ 0.4
C19orf47-205ENST00000580977 B4GALT4O60513 344 aa17.54■□□□□ 0.4
C19orf47-205ENST00000580977 TMEM240Q5SV17 173 aa17.54■□□□□ 0.4
C19orf47-205ENST00000580977 IFIT1BQ5T764 474 aaKnown RBP17.54■□□□□ 0.4
C19orf47-205ENST00000580977 MCF2L2Q86YR7 1114 aa17.54■□□□□ 0.4
C19orf47-205ENST00000580977 RUFY2Q8WXA3 655 aa17.54■□□□□ 0.4
C19orf47-205ENST00000580977 IL25Q9H293 177 aa17.54■□□□□ 0.4
C19orf47-205ENST00000580977 LAMA2P24043 3122 aaKnown RBP17.53■□□□□ 0.4
C19orf47-205ENST00000580977 DHX16O60231 1041 aaKnown RBP17.53■□□□□ 0.4
C19orf47-205ENST00000580977 DNAJB2P25686 324 aa17.53■□□□□ 0.4
C19orf47-205ENST00000580977 CYP2C18P33260 490 aa17.53■□□□□ 0.4
C19orf47-205ENST00000580977 PSMC6P62333 389 aa17.53■□□□□ 0.4
C19orf47-205ENST00000580977 PURAQ00577 322 aaKnown RBP17.53■□□□□ 0.4
C19orf47-205ENST00000580977 TRDNQ13061 729 aa17.53■□□□□ 0.4
C19orf47-205ENST00000580977 QRICH1Q2TAL8 776 aa17.53■□□□□ 0.4
C19orf47-205ENST00000580977 RASIP1Q5U651 963 aa17.53■□□□□ 0.4
C19orf47-205ENST00000580977 MTG1Q9BT17 334 aaPredicted RBP17.53■□□□□ 0.4
C19orf47-205ENST00000580977 MTIF3Q9H2K0 278 aaKnown RBP17.53■□□□□ 0.4
C19orf47-205ENST00000580977 IL23AQ9NPF7 189 aa17.53■□□□□ 0.4
C19orf47-205ENST00000580977 GPHNQ9NQX3 736 aaPredicted RBP17.53■□□□□ 0.4
C19orf47-205ENST00000580977 MRPL11Q9Y3B7 192 aaKnown RBP17.53■□□□□ 0.4
C19orf47-205ENST00000580977 DLL1O00548 723 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 KPNA6O60684 536 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 MYL3P08590 195 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 SUPT20HL2P0C7V6 817 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 TTLL4Q14679 1199 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 C16orf59Q7L2K0 433 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 FBXO11Q86XK2 927 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 NOC4LQ9BVI4 516 aaKnown RBP17.52■□□□□ 0.4
C19orf47-205ENST00000580977 TRPV6Q9H1D0 765 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.4
C19orf47-205ENST00000580977 U3KPZ7 1027 aaPredicted RBP17.52■□□□□ 0.4
C19orf47-205ENST00000580977 MYH6P13533 1939 aa17.52■□□□□ 0.4
C19orf47-205ENST00000580977 ACRP10323 421 aa17.51■□□□□ 0.39
C19orf47-205ENST00000580977 TXNP10599 105 aaKnown RBP17.51■□□□□ 0.39
C19orf47-205ENST00000580977 SEC23AQ15436 765 aa17.51■□□□□ 0.39
C19orf47-205ENST00000580977 ZNF365Q70YC5 407 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms